Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 121-333 |
| Cow position: | chrX:35224194-35224407 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 122-334 |
| Cow position: | chrX:23514116-23513905 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 122-362 |
| Cow position: | chrX:34792409-34792173 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 122-380 |
| Cow position: | chrX:34376846-34377098 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 122-381 |
| Cow position: | chrX:21986393-21986135 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 122-408 |
| Cow position: | chrX:5118603-5118316 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 122-408 |
| Cow position: | chrX:42247286-42246999 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 123-358 |
| Cow position: | chrX:20584224-20584464 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 123-374 |
| Cow position: | chrX:14884058-14883805 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 217 |
| Conread position: | 132-368 |
| Cow position: | chrX:17794890-17795127 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 132-370 |
| Cow position: | chrX:43115059-43115296 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 132-384 |
| Cow position: | chrX:45502059-45502308 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 132-397 |
| Cow position: | chrX:13177558-13177300 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 134-368 |
| Cow position: | chrX:34502833-34503066 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 134-407 |
| Cow position: | chrX:26881657-26881380 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 228 |
| Conread position: | 136-407 |
| Cow position: | chrX:20957162-20957420 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 140-380 |
| Cow position: | chrX:6413966-6414197 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 140-382 |
| Cow position: | chrX:23113196-23113444 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 143-393 |
| Cow position: | chrX:33639896-33640146 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 143-408 |
| Cow position: | chrX:17231655-17231919 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 191 |
| Conread position: | 146-370 |
| Cow position: | chrX:41192629-41192850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 146-376 |
| Cow position: | chrX:34837133-34836910 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 151-419 |
| Cow position: | chrX:38853129-38853395 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 154-368 |
| Cow position: | chrX:31311958-31312173 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 207 |
| Conread position: | 154-397 |
| Cow position: | chrX:23562567-23562804 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 155-366 |
| Cow position: | chrX:41238419-41238210 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 209, 63 |
| Conread position: | 156-370 |
| Cow position: | chrX:4153101-4152885 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 16, 206 |
| Conread position: | 159-368 |
| Cow position: | chrX:45976861-45977070 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 159-387 |
| Cow position: | chrX:32623504-32623735 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 196 |
| Conread position: | 160-312 |
| Cow position: | chrX:29542279-29542127 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 160-313 |
| Cow position: | chrX:30133380-30133227 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 160-334 |
| Cow position: | chrX:7509082-7509251 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-334 |
| Cow position: | chrX:7571843-7572017 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-347 |
| Cow position: | chrX:9651085-9650899 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 160-347 |
| Cow position: | chrX:18273118-18272933 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 160-347 |
| Cow position: | chrX:34532461-34532645 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-354 |
| Cow position: | chrX:6544196-6544386 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 160-356 |
| Cow position: | chrX:33539111-33539304 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 160-357 |
| Cow position: | chrX:616322-616124 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-361 |
| Cow position: | chrX:46072880-46072678 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 160-362 |
| Cow position: | chrX:46429881-46429679 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 160-367 |
| Cow position: | chrX:918787-918571 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 160-368 |
| Cow position: | chrX:11717848-11717639 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 160-368 |
| Cow position: | chrX:40035503-40035296 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 160-370 |
| Cow position: | chrX:34313969-34314170 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-371 |
| Cow position: | chrX:29601890-29601681 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-380 |
| Cow position: | chrX:37781171-37780952 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 160-384 |
| Cow position: | chrX:38549387-38549607 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 160-395 |
| Cow position: | chrX:42235588-42235350 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 160-396 |
| Cow position: | chrX:40557741-40557503 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-396 |
| Cow position: | chrX:41884474-41884240 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-397 |
| Cow position: | chrX:5872261-5872490 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 170, 9 |
| Conread position: | 160-397 |
| Cow position: | chrX:17725914-17726149 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-397 |
| Cow position: | chrX:36067953-36068192 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-405 |
| Cow position: | chrX:34401938-34402188 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 160-405 |
| Cow position: | chrX:47345272-47345509 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 160-406 |
| Cow position: | chrX:47344234-47344479 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 160-408 |
| Cow position: | chrX:13647845-13647602 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 160-408 |
| Cow position: | chrX:30338006-30337772 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 196, 9 |
| Conread position: | 160-408 |
| Cow position: | chrX:39220020-39220268 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 199, 9 |
| Conread position: | 160-408 |
| Cow position: | chrX:40826811-40826568 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 181, 9 |
| Conread position: | 160-418 |
| Cow position: | chrX:27394080-27393832 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-419 |
| Cow position: | chrX:40269428-40269692 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 164-347 |
| Cow position: | chrX:42470003-42469816 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 164-358 |
| Cow position: | chrX:619061-618873 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 145 |
| Conread position: | 164-361 |
| Cow position: | chrX:35542838-35543026 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 164-368 |
| Cow position: | chrX:38006821-38006627 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 164-368 |
| Cow position: | chrX:38560501-38560705 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 164-378 |
| Cow position: | chrX:34505108-34504896 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 164-396 |
| Cow position: | chrX:878440-878208 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 50, 196 |
| Conread position: | 164-408 |
| Cow position: | chrX:22115373-22115133 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-408 |
| Cow position: | chrX:40685388-40685147 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 54, 196 |
| Conread position: | 165-305 |
| Cow position: | chrX:13785419-13785280 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 165-316 |
| Cow position: | chrX:24365881-24365727 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 165-319 |
| Cow position: | chrX:45414356-45414207 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 165-353 |
| Cow position: | chrX:37574788-37574971 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 165-353 |
| Cow position: | chrX:45846043-45846232 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 165-354 |
| Cow position: | chrX:37232357-37232539 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 165-363 |
| Cow position: | chrX:12437326-12437131 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 165-368 |
| Cow position: | chrX:9201494-9201692 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 131, 51 |
| Conread position: | 165-368 |
| Cow position: | chrX:34411786-34411990 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 196 |
| Conread position: | 165-374 |
| Cow position: | chrX:23091812-23092023 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 165-378 |
| Cow position: | chrX:31436422-31436628 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 165-380 |
| Cow position: | chrX:1466105-1466319 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 165-380 |
| Cow position: | chrX:8869460-8869245 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 185 |
| Conread position: | 165-380 |
| Cow position: | chrX:29050191-29050404 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 165-382 |
| Cow position: | chrX:9252218-9252004 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 165-382 |
| Cow position: | chrX:11633624-11633841 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 165-383 |
| Cow position: | chrX:45174792-45175011 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 165-397 |
| Cow position: | chrX:29680316-29680089 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 178, 66 |
| Conread position: | 165-398 |
| Cow position: | chrX:14275802-14275566 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 165-407 |
| Cow position: | chrX:169601-169360 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 233, 54 |
| Conread position: | 165-408 |
| Cow position: | chrX:42381158-42380928 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 211, 48 |
| Conread position: | 165-418 |
| Cow position: | chrX:15820541-15820790 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 166-364 |
| Cow position: | chrX:11073247-11073049 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 166-386 |
| Cow position: | chrX:33493722-33493939 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 169-318 |
| Cow position: | chrX:44095204-44095356 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 171-376 |
| Cow position: | chrX:41871015-41871218 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 188 |
| Conread position: | 171-378 |
| Cow position: | chrX:42927869-42927670 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 172-372 |
| Cow position: | chrX:22393035-22392837 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 173-380 |
| Cow position: | chrX:5919442-5919651 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 188 |
| Conread position: | 173-408 |
| Cow position: | chrX:35985770-35986002 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 174-332 |
| Cow position: | chrX:13913020-13913185 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 174-370 |
| Cow position: | chrX:5135572-5135374 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 180 |
| Conread position: | 179-369 |
| Cow position: | chrX:27306410-27306601 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 179-372 |
| Cow position: | chrX:19469548-19469356 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 182-345 |
| Cow position: | chrX:47061355-47061519 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 182-363 |
| Cow position: | chrX:45430061-45429882 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 184-342 |
| Cow position: | chrX:47362662-47362503 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-347 |
| Cow position: | chrX:19394515-19394678 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-347 |
| Cow position: | chrX:29585083-29585244 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 184-354 |
| Cow position: | chrX:12082362-12082192 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 184-367 |
| Cow position: | chrX:24749050-24749230 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 184-370 |
| Cow position: | chrX:11326137-11325949 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 184-376 |
| Cow position: | chrX:6599821-6599630 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 175 |
| Conread position: | 184-388 |
| Cow position: | chrX:45670184-45670384 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 184-399 |
| Cow position: | chrX:37072357-37072564 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 185-365 |
| Cow position: | chrX:22074758-22074943 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 185-397 |
| Cow position: | chrX:40532080-40531870 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 186-346 |
| Cow position: | chrX:4289404-4289568 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 186-369 |
| Cow position: | chrX:12979872-12979689 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 174 |
| Conread position: | 188-364 |
| Cow position: | chrX:38642216-38642391 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 188-380 |
| Cow position: | chrX:22482732-22482530 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 189-362 |
| Cow position: | chrX:7695718-7695888 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 189-408 |
| Cow position: | chrX:41941594-41941805 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 190-377 |
| Cow position: | chrX:19273744-19273552 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 199-370 |
| Cow position: | chrX:33855244-33855074 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 206-356 |
| Cow position: | chrX:45383061-45382912 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 206-372 |
| Cow position: | chrX:16836303-16836139 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 209-362 |
| Cow position: | chrX:12972668-12972824 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 211-398 |
| Cow position: | chrX:42893914-42894104 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 212-398 |
| Cow position: | chrX:44926453-44926631 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 213-362 |
| Cow position: | chrX:4466958-4467107 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 213-378 |
| Cow position: | chrX:27145595-27145758 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 217-386 |
| Cow position: | chrX:2935952-2936122 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 218-404 |
| Cow position: | chrX:4996581-4996766 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 142 |
| Conread position: | 219-380 |
| Cow position: | chrX:39290356-39290513 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 220-382 |
| Cow position: | chrX:11656079-11656239 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 225-364 |
| Cow position: | chrX:29501878-29501742 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 226-380 |
| Cow position: | chrX:27668954-27668802 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 226-408 |
| Cow position: | chrX:32943072-32942893 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 172, 132 |
| Conread position: | 239-397 |
| Cow position: | chrX:34508561-34508717 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
Show alignments to all cow chromosomes.