Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-133 |
| Cow position: | chr11:7687459-7687589 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 1-141 |
| Cow position: | chr11:31414697-31414560 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-189 |
| Cow position: | chr11:9736412-9736225 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-282 |
| Cow position: | chr11:17924903-17924619 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 1-312 |
| Cow position: | chr11:15998434-15998743 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 1-347 |
| Cow position: | chr11:10049664-10050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 27 |
| Conread position: | 1-369 |
| Cow position: | chr11:10210431-10210054 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 180 |
| Conread position: | 1-390 |
| Cow position: | chr11:44496056-44495666 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 61 |
| Conread position: | 1-394 |
| Cow position: | chr11:32272164-32271783 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 100 |
| Conread position: | 1-402 |
| Cow position: | chr11:26566176-26565780 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 225, 108 |
| Conread position: | 1-403 |
| Cow position: | chr11:14729980-14729581 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 223, 151 |
| Conread position: | 1-411 |
| Cow position: | chr11:28230209-28229803 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 169 |
| Conread position: | 1-421 |
| Cow position: | chr11:7113139-7113554 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-423 |
| Cow position: | chr11:8262160-8261742 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 1-427 |
| Cow position: | chr11:1496531-1496108 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 1-427 |
| Cow position: | chr11:3492552-3492977 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-427 |
| Cow position: | chr11:4041527-4041110 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 1-427 |
| Cow position: | chr11:15983163-15983590 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 160 |
| Conread position: | 1-427 |
| Cow position: | chr11:17108146-17107720 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-427 |
| Cow position: | chr11:19064710-19064283 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr11:32450407-32450833 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr11:52418928-52419354 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 15 |
| Conread position: | 1-427 |
| Cow position: | chr11:53287915-53287490 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 142 |
| Conread position: | 1-427 |
| Cow position: | chr11:57628507-57628080 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr11:63660042-63659622 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr11:67450037-67450464 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 198 |
| Conread position: | 1-427 |
| Cow position: | chr11:67847028-67846605 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 62 |
| Conread position: | 1-431 |
| Cow position: | chr11:8887610-8887189 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 38 |
| Conread position: | 1-431 |
| Cow position: | chr11:34020443-34020859 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-431 |
| Cow position: | chr11:37477579-37477150 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 58 |
| Conread position: | 1-436 |
| Cow position: | chr11:20921206-20920770 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr11:25527112-25527533 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 140 |
| Conread position: | 1-436 |
| Cow position: | chr11:36744641-36744205 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr11:9659859-9659411 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 57 |
| Conread position: | 1-437 |
| Cow position: | chr11:21466616-21467053 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr11:30304785-30305221 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 35 |
| Conread position: | 1-437 |
| Cow position: | chr11:37492109-37491670 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 1-444 |
| Cow position: | chr11:12351524-12351080 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 64 |
| Conread position: | 1-446 |
| Cow position: | chr11:10846984-10847427 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-455 |
| Cow position: | chr11:44895477-44895009 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 131, 26 |
| Conread position: | 1-503 |
| Cow position: | chr11:33044581-33044085 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 160 |
| Conread position: | 1-520 |
| Cow position: | chr11:42428879-42429394 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 1-521 |
| Cow position: | chr11:87127383-87127901 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 1-560 |
| Cow position: | chr11:8282618-8283171 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 61 |
| Conread position: | 2-315 |
| Cow position: | chr11:13067470-13067169 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 220, 135 |
| Conread position: | 2-315 |
| Cow position: | chr11:13162534-13162835 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 220, 135 |
| Conread position: | 2-389 |
| Cow position: | chr11:30125706-30125335 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 121 |
| Conread position: | 2-395 |
| Cow position: | chr11:9157885-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-412 |
| Cow position: | chr11:19102946-19102535 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-412 |
| Cow position: | chr11:77728985-77728569 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-417 |
| Cow position: | chr11:28055055-28054644 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 113 |
| Conread position: | 2-431 |
| Cow position: | chr11:23876845-23877271 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 197 |
| Conread position: | 2-431 |
| Cow position: | chr11:26125390-26124962 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 60 |
| Conread position: | 2-431 |
| Cow position: | chr11:29669088-29668662 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr11:43515090-43514661 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr11:44157695-44157284 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 184 |
| Conread position: | 2-431 |
| Cow position: | chr11:72110420-72109996 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 119 |
| Conread position: | 2-433 |
| Cow position: | chr11:44230669-44231085 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 90 |
| Conread position: | 2-436 |
| Cow position: | chr11:9607034-9606603 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 118 |
| Conread position: | 2-437 |
| Cow position: | chr11:54209159-54209588 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 160 |
| Conread position: | 2-446 |
| Cow position: | chr11:71329185-71329629 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 46 |
| Conread position: | 2-456 |
| Cow position: | chr11:85394268-85393814 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-457 |
| Cow position: | chr11:45110901-45111366 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 149 |
| Conread position: | 2-463 |
| Cow position: | chr11:4271329-4270858 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 120 |
| Conread position: | 2-463 |
| Cow position: | chr11:11987661-11988110 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 72 |
| Conread position: | 2-463 |
| Cow position: | chr11:38835876-38835428 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 197 |
| Conread position: | 2-463 |
| Cow position: | chr11:41171152-41170689 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr11:58133910-58134390 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 196 |
| Conread position: | 2-560 |
| Cow position: | chr11:10089876-10090441 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 60 |
| Conread position: | 3-383 |
| Cow position: | chr11:44860983-44860607 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 109 |
| Conread position: | 3-431 |
| Cow position: | chr11:12358880-12358456 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 137 |
| Conread position: | 3-436 |
| Cow position: | chr11:61401498-61401076 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 138 |
| Conread position: | 3-457 |
| Cow position: | chr11:4028008-4027565 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 60 |
| Conread position: | 5-437 |
| Cow position: | chr11:75919962-75920378 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 31 |
| Conread position: | 5-454 |
| Cow position: | chr11:28063234-28063667 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 99 |
| Conread position: | 8-370 |
| Cow position: | chr11:81853076-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 216, 112 |
| Conread position: | 8-416 |
| Cow position: | chr11:37093515-37093106 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 190 |
| Conread position: | 8-431 |
| Cow position: | chr11:24392872-24393286 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 135 |
| Conread position: | 8-457 |
| Cow position: | chr11:8244254-8244702 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 9-191 |
| Cow position: | chr11:77235313-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-457 |
| Cow position: | chr11:66726025-66726469 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 128 |
| Conread position: | 29-191 |
| Cow position: | chr11:46962849-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 29-394 |
| Cow position: | chr11:43731978-43732337 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 107 |
| Conread position: | 41-436 |
| Cow position: | chr11:5343638-5343240 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 157 |
| Conread position: | 44-437 |
| Cow position: | chr11:37065541-37065142 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 117 |
| Conread position: | 49-280 |
| Cow position: | chr11:65161971-65161745 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 50-474 |
| Cow position: | chr11:17220633-17220202 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 148 |
| Conread position: | 53-399 |
| Cow position: | chr11:30186893-30187227 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 55-331 |
| Cow position: | chr11:32684882-32685154 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 169, 80 |
| Conread position: | 68-436 |
| Cow position: | chr11:64045604-64045973 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 130 |
| Conread position: | 82-387 |
| Cow position: | chr11:47761310-47761017 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 221 |
| Conread position: | 84-397 |
| Cow position: | chr11:40776920-40776606 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 114 |
| Conread position: | 97-436 |
| Cow position: | chr11:45655629-45655963 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 127, 91 |
| Conread position: | 105-409 |
| Cow position: | chr11:67867661-67867365 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 107-538 |
| Cow position: | chr11:75874140-75873705 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 117-364 |
| Cow position: | chr11:31414267-31414023 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 122-436 |
| Cow position: | chr11:73476968-73477283 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 76 |
| Conread position: | 130-493 |
| Cow position: | chr11:17280628-17280277 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 131-366 |
| Cow position: | chr11:3240317-3240550 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 131-376 |
| Cow position: | chr11:45548143-45548388 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 131-417 |
| Cow position: | chr11:52886822-52886547 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 172-435 |
| Cow position: | chr11:8519703-8519962 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 181-404 |
| Cow position: | chr11:9734928-9734705 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 201-427 |
| Cow position: | chr11:38505866-38505639 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 212-437 |
| Cow position: | chr11:31925918-31926147 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 85 |
| Conread position: | 223-405 |
| Cow position: | chr11:18073659-18073472 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 224-488 |
| Cow position: | chr11:4065471-4065202 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 232-413 |
| Cow position: | chr11:30183533-30183362 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 232-424 |
| Cow position: | chr11:12093328-12093521 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 236-427 |
| Cow position: | chr11:33194778-33194587 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 239-414 |
| Cow position: | chr11:77235493-77235668 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 241-463 |
| Cow position: | chr11:53432286-53432063 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 245-454 |
| Cow position: | chr11:9220336-9220130 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 256-585 |
| Cow position: | chr11:7316668-7316991 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 291-456 |
| Cow position: | chr11:76374371-76374207 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 307-437 |
| Cow position: | chr11:8267696-8267566 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 309-444 |
| Cow position: | chr11:59369456-59369589 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 331-437 |
| Cow position: | chr11:256317-256211 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-588 |
| Cow position: | chr11:30125106-30124909 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 78 |
Show alignments to all cow chromosomes.