Cow genome map


           Conread name:
           Ss1.1-rplun0138_i19.5
        

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               175, 134
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 160
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 148
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 58
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 160
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 61
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 61
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 125
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 139
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 42
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 19
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-388
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               214, 136
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 60
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 21
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 34
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               2-466
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 34
               

               Conread position:
               2-504
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 121
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               3-458
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 140
               

               Conread position:
               4-434
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               8-431
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               8-436
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 37
               

               Conread position:
               8-520
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 107
               

               Conread position:
               59-415
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               65-432
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               163, 27
               

               Conread position:
               79-521
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               290
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               95-417
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 87
               

               Conread position:
               107-419
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               158, 81
               

               Conread position:
               126-404
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               98, 72
               

               Conread position:
               136-343
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               148-436
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               152-431
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               153-437
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               229-437
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               235-427
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               316-437
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               328-436
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.