Cow genome map

Conread name: Ss1.1-rplun0138_i19.5

Conread position: 1-144
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 39

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 197, 0

Conread position: 1-250
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 45

Conread position: 1-263
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 71

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-301
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 1-319
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-398
Cow position:
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 87

Conread position: 1-406
Cow position:
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 61

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-426
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 115

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 1-427
Cow position:
Alignm length: 431
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 86

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 432
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 27

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 97

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 18

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 1-433
Cow position:
Alignm length: 438
Alignm identity: 281
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 53

Conread position: 1-436
Cow position:
Alignm length: 441
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-436
Cow position:
Alignm length: 439
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-436
Cow position:
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-437
Cow position:
Alignm length: 441
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 81

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 94

Conread position: 1-437
Cow position:
Alignm length: 454
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 184

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 42

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 177

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 35

Conread position: 1-444
Cow position:
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 161

Conread position: 1-447
Cow position:
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 61

Conread position: 1-447
Cow position:
Alignm length: 451
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 115

Conread position: 1-449
Cow position:
Alignm length: 452
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 43

Conread position: 1-452
Cow position:
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 38

Conread position: 1-457
Cow position:
Alignm length: 473
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 176

Conread position: 1-457
Cow position:
Alignm length: 460
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 142

Conread position: 1-458
Cow position:
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 61

Conread position: 1-462
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 66

Conread position: 1-462
Cow position:
Alignm length: 471
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 1-489
Cow position:
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 59

Conread position: 1-504
Cow position:
Alignm length: 512
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 73

Conread position: 1-508
Cow position:
Alignm length: 520
Alignm identity: 319
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 223, 77

Conread position: 1-520
Cow position:
Alignm length: 525
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 198

Conread position: 1-520
Cow position:
Alignm length: 524
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 27

Conread position: 1-520
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 87

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 27

Conread position: 1-528
Cow position:
Alignm length: 534
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 39

Conread position: 1-578
Cow position:
Alignm length: 581
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 62

Conread position: 1-588
Cow position:
Alignm length: 591
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 30

Conread position: 2-163
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 2-191
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 170, 78

Conread position: 2-341
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 34

Conread position: 2-363
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 140

Conread position: 2-371
Cow position:
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 196

Conread position: 2-390
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-417
Cow position:
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 147

Conread position: 2-423
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 26

Conread position: 2-427
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 7

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 123

Conread position: 2-431
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 123

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 140

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 141

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-436
Cow position:
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 12

Conread position: 2-436
Cow position:
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 141

Conread position: 2-436
Cow position:
Alignm length: 439
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 2-437
Cow position:
Alignm length: 440
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 136

Conread position: 2-437
Cow position:
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 59

Conread position: 2-437
Cow position:
Alignm length: 440
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 196

Conread position: 2-437
Cow position:
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 158

Conread position: 2-437
Cow position:
Alignm length: 448
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-446
Cow position:
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 87

Conread position: 2-457
Cow position:
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 89

Conread position: 2-457
Cow position:
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 198

Conread position: 2-458
Cow position:
Alignm length: 462
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 120

Conread position: 2-460
Cow position:
Alignm length: 463
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 2-463
Cow position:
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 58

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 57

Conread position: 2-470
Cow position:
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-488
Cow position:
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 196

Conread position: 2-520
Cow position:
Alignm length: 529
Alignm identity: 340
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 178, 134

Conread position: 3-264
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 221, 65

Conread position: 3-388
Cow position:
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 116

Conread position: 3-417
Cow position:
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 195

Conread position: 4-424
Cow position:
Alignm length: 425
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 118

Conread position: 8-427
Cow position:
Alignm length: 423
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 190

Conread position: 8-427
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 180

Conread position: 8-431
Cow position:
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 8-431
Cow position:
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 66

Conread position: 8-437
Cow position:
Alignm length: 433
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 167

Conread position: 8-437
Cow position:
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 31

Conread position: 8-458
Cow position:
Alignm length: 458
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 192

Conread position: 8-458
Cow position:
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 31

Conread position: 8-463
Cow position:
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 158

Conread position: 8-464
Cow position:
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 64

Conread position: 8-505
Cow position:
Alignm length: 507
Alignm identity: 330
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 214, 33

Conread position: 8-505
Cow position:
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 89

Conread position: 9-427
Cow position:
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 9-457
Cow position:
Alignm length: 455
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 31

Conread position: 11-427
Cow position:
Alignm length: 420
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 187

Conread position: 15-431
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 20

Conread position: 21-436
Cow position:
Alignm length: 418
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 33

Conread position: 27-431
Cow position:
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 72

Conread position: 30-427
Cow position:
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 148

Conread position: 39-257
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 184, 50

Conread position: 41-436
Cow position:
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 163

Conread position: 43-427
Cow position:
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 61

Conread position: 50-294
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 47

Conread position: 50-505
Cow position:
Alignm length: 463
Alignm identity: 308
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 123, 61

Conread position: 51-361
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 173, 21

Conread position: 59-447
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 138

Conread position: 68-437
Cow position:
Alignm length: 373
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 130

Conread position: 75-244
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 148, 74

Conread position: 92-437
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 69

Conread position: 94-521
Cow position:
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 101-513
Cow position:
Alignm length: 434
Alignm identity: 278
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 59

Conread position: 109-245
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 84

Conread position: 112-431
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 13

Conread position: 112-525
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 86

Conread position: 116-453
Cow position:
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 82

Conread position: 125-505
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 45

Conread position: 125-508
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 98, 22

Conread position: 135-427
Cow position:
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 63

Conread position: 137-436
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 137-525
Cow position:
Alignm length: 393
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 152-437
Cow position:
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 161-437
Cow position:
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 161-457
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 166-437
Cow position:
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 166-525
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 174-457
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 24

Conread position: 180-437
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 18

Conread position: 211-427
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 56

Conread position: 211-427
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 56

Conread position: 236-427
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 29

Conread position: 248-437
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 262-504
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 273-456
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 15

Conread position: 279-427
Cow position:
Alignm length: 150
Alignm identity: 127
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 281-437
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 287-436
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 63

Conread position: 291-457
Cow position:
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 315-434
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 350-556
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 116

Show alignments to all cow chromosomes.