Cow genome map


           Conread name:
           Ss1.1-rplun0138_i19.5
        

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 89
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               221, 87
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 35
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               221, 103
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 67
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 61
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 61
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 61
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 98
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 38
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 148
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 109
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 215
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 35
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 61
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 62
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 199
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 62
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               1-457
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               1-458
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 124
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 197
               

               Conread position:
               1-522
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 61
               

               Conread position:
               2-196
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 42
               

               Conread position:
               2-424
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 108
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 72
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 198
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 60
               

               Conread position:
               2-453
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 46
               

               Conread position:
               2-457
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 37
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 136
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 195
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 196
               

               Conread position:
               2-585
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 60
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               8-426
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               8-431
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 103
               

               Conread position:
               9-578
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 27
               

               Conread position:
               10-361
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 44
               

               Conread position:
               12-427
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 186
               

               Conread position:
               21-455
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 113
               

               Conread position:
               25-504
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               326
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               39-437
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 35
               

               Conread position:
               39-460
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 82
               

               Conread position:
               49-371
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               174, 89
               

               Conread position:
               50-414
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 73
               

               Conread position:
               60-362
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 76
               

               Conread position:
               63-401
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               67-428
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               159, 67
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               92-427
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 106
               

               Conread position:
               98-427
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 100
               

               Conread position:
               104-437
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 84
               

               Conread position:
               111-359
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               123-453
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               152-525
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               157-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               179-457
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               193-437
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               223-456
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               227-437
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 40
               

               Conread position:
               231-402
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               248-525
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               279-577
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               290-437
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               307-521
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               148, 6
               
Show alignments to all cow chromosomes.