Cow genome map

Conread name: Ss1.1-rplun0138_i19.5

Conread position: 1-164
Cow position: chr2:5481274-5481111 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-192
Cow position: chr2:1491060-1490870 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 171, 98

Conread position: 1-203
Cow position: chr2:5519620-5519419 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 197, 0

Conread position: 1-203
Cow position: chr2:67421477-67421276 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 104, 87

Conread position: 1-204
Cow position: chr2:32388934-32389127 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 1-211
Cow position: chr2:40245427-40245632 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-240
Cow position: chr2:41149411-41149650 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 165, 134

Conread position: 1-245
Cow position: chr2:782368-782140 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 223, 20

Conread position: 1-257
Cow position: chr2:34618104-34618357 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 225, 42

Conread position: 1-304
Cow position: chr2:3730103-3730396 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 215, 53

Conread position: 1-311
Cow position: chr2:32458640-32458332 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 1-311
Cow position: chr2:46402887-46402590 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 223, 49

Conread position: 1-325
Cow position: chr2:26865175-26864863 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 115

Conread position: 1-377
Cow position: chr2:52655837-52656210 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 161

Conread position: 1-390
Cow position: chr2:202283-201908 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 35

Conread position: 1-392
Cow position: chr2:61130922-61130574 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 223, 51

Conread position: 1-392
Cow position: chr2:85356401-85356019 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 53

Conread position: 1-399
Cow position: chr2:35352744-35353133 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 89

Conread position: 1-404
Cow position: chr2:10294499-10294909 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 223, 63

Conread position: 1-410
Cow position: chr2:36979748-36980152 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 20

Conread position: 1-422
Cow position: chr2:14560567-14560969 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 147

Conread position: 1-423
Cow position: chr2:26921064-26921486 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 178

Conread position: 1-427
Cow position: chr2:212851-212427 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 176

Conread position: 1-427
Cow position: chr2:2413429-2413002 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 197

Conread position: 1-427
Cow position: chr2:9907280-9907707 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position: chr2:25031108-25030682 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 1-427
Cow position: chr2:39420960-39421373 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 121

Conread position: 1-427
Cow position: chr2:41656452-41656876 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 61

Conread position: 1-427
Cow position: chr2:44090667-44091095 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position: chr2:47039045-47038620 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position: chr2:51991163-51990736 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 192

Conread position: 1-427
Cow position: chr2:57334568-57334990 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 151

Conread position: 1-431
Cow position: chr2:4404980-4404550 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-431
Cow position: chr2:59414312-59413882 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 151

Conread position: 1-433
Cow position: chr2:2380493-2380907 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 201

Conread position: 1-435
Cow position: chr2:42333899-42333488 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 223, 61

Conread position: 1-436
Cow position: chr2:3325197-3324761 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-436
Cow position: chr2:49471614-49472050 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-436
Cow position: chr2:57142319-57141883 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-437
Cow position: chr2:422435-422872 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 201

Conread position: 1-437
Cow position: chr2:6772795-6772368 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 32

Conread position: 1-437
Cow position: chr2:10712062-10711632 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 135

Conread position: 1-437
Cow position: chr2:10843973-10843546 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 1-437
Cow position: chr2:11969394-11968965 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 124

Conread position: 1-437
Cow position: chr2:41685881-41686322 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 199

Conread position: 1-437
Cow position: chr2:44106726-44106305 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 32

Conread position: 1-437
Cow position: chr2:44346083-44346519 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-437
Cow position: chr2:46946036-46946471 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 51

Conread position: 1-437
Cow position: chr2:52152483-52152059 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 62

Conread position: 1-437
Cow position: chr2:52615839-52616278 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 198

Conread position: 1-437
Cow position: chr2:72922464-72922027 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 1-437
Cow position: chr2:82166976-82167413 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 190

Conread position: 1-440
Cow position: chr2:53473790-53473354 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-444
Cow position: chr2:2102100-2101659 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 162

Conread position: 1-449
Cow position: chr2:16076932-16076480 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 269

Conread position: 1-456
Cow position: chr2:78741502-78741953 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 35

Conread position: 1-485
Cow position: chr2:769022-768539 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 1-504
Cow position: chr2:7211071-7211567 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 136

Conread position: 1-504
Cow position: chr2:28746839-28747327 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 31

Conread position: 1-504
Cow position: chr2:63293204-63292694 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 62

Conread position: 1-513
Cow position: chr2:1647525-1648048 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 334
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 8

Conread position: 1-535
Cow position: chr2:7901650-7902179 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 168

Conread position: 1-559
Cow position: chr2:1673286-1672747 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 59

Conread position: 1-560
Cow position: chr2:28621460-28620916 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 1-560
Cow position: chr2:28643751-28643208 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 147

Conread position: 1-578
Cow position: chr2:16288620-16289168 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 35

Conread position: 1-588
Cow position: chr2:15578204-15577617 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 118

Conread position: 1-588
Cow position: chr2:34565559-34564987 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 176

Conread position: 2-133
Cow position: chr2:8117621-8117750 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr2:45213887-45213743 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-169
Cow position: chr2:12224778-12224611 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-196
Cow position: chr2:25888838-25888643 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 180, 0

Conread position: 2-205
Cow position: chr2:47604433-47604239 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 2-276
Cow position: chr2:975905-975635 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 34

Conread position: 2-305
Cow position: chr2:10733467-10733171 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-357
Cow position: chr2:24145644-24145993 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-370
Cow position: chr2:4235545-4235896 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 41

Conread position: 2-385
Cow position: chr2:10730189-10729806 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 54

Conread position: 2-404
Cow position: chr2:56438351-56437960 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 97

Conread position: 2-427
Cow position: chr2:5814041-5813591 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 7

Conread position: 2-431
Cow position: chr2:176160-175731 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 196

Conread position: 2-431
Cow position: chr2:283324-282895 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-431
Cow position: chr2:16899615-16900046 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-431
Cow position: chr2:26868640-26869064 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 2-431
Cow position: chr2:28650857-28650434 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 61

Conread position: 2-431
Cow position: chr2:50076973-50077393 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 34

Conread position: 2-435
Cow position: chr2:78761844-78762272 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 139

Conread position: 2-436
Cow position: chr2:6960114-6960550 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 2-437
Cow position: chr2:10269292-10268856 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-437
Cow position: chr2:19009602-19010036 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 195

Conread position: 2-437
Cow position: chr2:32654716-32655140 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 102

Conread position: 2-437
Cow position: chr2:44991911-44991492 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 136

Conread position: 2-453
Cow position: chr2:11159758-11159310 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-460
Cow position: chr2:11691563-11692003 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 299
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 168, 132

Conread position: 2-460
Cow position: chr2:15580617-15580160 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 308
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 125, 99

Conread position: 2-461
Cow position: chr2:77208031-77208471 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 312
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 222, 37

Conread position: 2-463
Cow position: chr2:13046321-13045875 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 90

Conread position: 2-463
Cow position: chr2:42672017-42671557 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 60

Conread position: 2-463
Cow position: chr2:47810380-47810843 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 66

Conread position: 2-463
Cow position: chr2:50983859-50983398 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 83

Conread position: 2-463
Cow position: chr2:52062035-52062498 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position: chr2:65939078-65938620 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 61

Conread position: 2-463
Cow position: chr2:81256187-81256635 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 66

Conread position: 2-474
Cow position: chr2:45921877-45921422 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 315
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 221, 19

Conread position: 2-488
Cow position: chr2:28792615-28793097 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 200

Conread position: 2-488
Cow position: chr2:53329117-53329598 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 164

Conread position: 2-496
Cow position: chr2:5905479-5904994 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 137

Conread position: 3-353
Cow position: chr2:54649428-54649102 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 106, 57

Conread position: 3-435
Cow position: chr2:80516420-80516862 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 214

Conread position: 3-501
Cow position: chr2:20903768-20903302 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 105

Conread position: 6-431
Cow position: chr2:22077171-22077584 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 18

Conread position: 8-338
Cow position: chr2:53552549-53552873 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 51

Conread position: 8-423
Cow position: chr2:5870960-5870564 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 8-431
Cow position: chr2:10186859-10186436 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 190

Conread position: 8-436
Cow position: chr2:2184882-2184453 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 190

Conread position: 8-436
Cow position: chr2:80956262-80955833 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 190

Conread position: 9-437
Cow position: chr2:41172064-41172484 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 45

Conread position: 9-457
Cow position: chr2:44935709-44935263 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 131

Conread position: 9-575
Cow position: chr2:2357082-2356531 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 28

Conread position: 11-341
Cow position: chr2:73191316-73191630 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 165, 52

Conread position: 18-437
Cow position: chr2:3837596-3837206 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 22-576
Cow position: chr2:39621676-39622241 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 109

Conread position: 31-308
Cow position: chr2:6877888-6878152 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 112

Conread position: 44-508
Cow position: chr2:80586515-80586978 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 297
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 54

Conread position: 49-588
Cow position: chr2:14821927-14822453 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 13

Conread position: 49-588
Cow position: chr2:36054219-36053703 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 50

Conread position: 50-505
Cow position: chr2:43959036-43959457 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 174, 12

Conread position: 50-520
Cow position: chr2:72109110-72108658 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 174, 72

Conread position: 56-522
Cow position: chr2:74391694-74391216 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 143

Conread position: 66-423
Cow position: chr2:290398-290042 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 131

Conread position: 75-431
Cow position: chr2:6755879-6755518 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 84

Conread position: 77-427
Cow position: chr2:2363641-2363978 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 93-457
Cow position: chr2:50321740-50322108 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 44

Conread position: 95-424
Cow position: chr2:24907643-24907310 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 213
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 98

Conread position: 101-431
Cow position: chr2:24921866-24922197 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 97

Conread position: 125-407
Cow position: chr2:66309601-66309318 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 95, 73

Conread position: 126-322
Cow position: chr2:8118055-8118252 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 72

Conread position: 128-560
Cow position: chr2:36031241-36030815 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 71

Conread position: 131-425
Cow position: chr2:10612130-10611834 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 141-433
Cow position: chr2:5485731-5485452 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 173, 15

Conread position: 142-307
Cow position: chr2:29147902-29147736 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 51

Conread position: 145-440
Cow position: chr2:59963718-59963422 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 79, 53

Conread position: 152-513
Cow position: chr2:51305217-51304862 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 156-404
Cow position: chr2:52350326-52350573 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 42

Conread position: 170-447
Cow position: chr2:5481132-5480854 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 178-300
Cow position: chr2:15062775-15062654 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 20

Conread position: 183-437
Cow position: chr2:45213740-45213481 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 184-351
Cow position: chr2:6638687-6638855 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 14

Conread position: 205-431
Cow position: chr2:67419729-67419501 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 213-483
Cow position: chr2:28616627-28616359 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 54

Conread position: 223-427
Cow position: chr2:2088583-2088379 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 42

Conread position: 223-436
Cow position: chr2:5474106-5474319 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 44

Conread position: 223-437
Cow position: chr2:4926586-4926372 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 92, 42

Conread position: 224-520
Cow position: chr2:32389376-32389672 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 41

Conread position: 241-437
Cow position: chr2:54737118-54737314 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 23

Conread position: 280-436
Cow position: chr2:49590047-49590204 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 292-431
Cow position: chr2:85068901-85068761 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 32

Conread position: 298-578
Cow position: chr2:41149656-41149935 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 75

Conread position: 313-437
Cow position: chr2:1490296-1490172 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 317-427
Cow position: chr2:57588381-57588490 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 360-556
Cow position: chr2:24393442-24393251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 0

Show alignments to all cow chromosomes.