Cow genome map

Conread name: Ss1.1-rplun0138_i19.5

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 160, 0

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 197, 0

Conread position: 1-282
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-347
Cow position:
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-368
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 73

Conread position: 1-386
Cow position:
Alignm length: 390
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 35

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 1-427
Cow position:
Alignm length: 431
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 91

Conread position: 1-427
Cow position:
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 115

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 180

Conread position: 1-435
Cow position:
Alignm length: 438
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 63

Conread position: 1-436
Cow position:
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 165

Conread position: 1-437
Cow position:
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 160

Conread position: 1-437
Cow position:
Alignm length: 441
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 1-437
Cow position:
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-437
Cow position:
Alignm length: 441
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 199

Conread position: 1-444
Cow position:
Alignm length: 447
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 192

Conread position: 1-447
Cow position:
Alignm length: 451
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-541
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 93

Conread position: 1-541
Cow position:
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 197

Conread position: 1-556
Cow position:
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 12

Conread position: 1-588
Cow position:
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-588
Cow position:
Alignm length: 595
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 198

Conread position: 2-391
Cow position:
Alignm length: 393
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 222, 34

Conread position: 2-417
Cow position:
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 195

Conread position: 2-427
Cow position:
Alignm length: 429
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 97

Conread position: 2-427
Cow position:
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 60

Conread position: 2-431
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 60

Conread position: 2-431
Cow position:
Alignm length: 436
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 121

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 123

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 196

Conread position: 2-432
Cow position:
Alignm length: 434
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 32

Conread position: 2-437
Cow position:
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 34

Conread position: 2-437
Cow position:
Alignm length: 440
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 196

Conread position: 2-437
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 141

Conread position: 2-437
Cow position:
Alignm length: 439
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 173

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 18

Conread position: 2-463
Cow position:
Alignm length: 466
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position:
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 138

Conread position: 2-487
Cow position:
Alignm length: 500
Alignm identity: 327
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 158, 18

Conread position: 2-508
Cow position:
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 132

Conread position: 2-585
Cow position:
Alignm length: 588
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 141

Conread position: 3-155
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 3-270
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 3-414
Cow position:
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 200

Conread position: 3-437
Cow position:
Alignm length: 440
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 59

Conread position: 3-437
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 195

Conread position: 3-440
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 59

Conread position: 3-451
Cow position:
Alignm length: 453
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 195

Conread position: 4-585
Cow position:
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 97

Conread position: 5-435
Cow position:
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 57

Conread position: 8-327
Cow position:
Alignm length: 328
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 208, 80

Conread position: 8-427
Cow position:
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 64

Conread position: 8-457
Cow position:
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 46

Conread position: 9-315
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 189

Conread position: 9-522
Cow position:
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 133

Conread position: 10-359
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 297, 134

Conread position: 12-437
Cow position:
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 50

Conread position: 23-427
Cow position:
Alignm length: 408
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 175

Conread position: 23-457
Cow position:
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 18

Conread position: 25-261
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 147

Conread position: 26-451
Cow position:
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 65

Conread position: 30-578
Cow position:
Alignm length: 569
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 182

Conread position: 34-430
Cow position:
Alignm length: 406
Alignm identity: 254
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 14

Conread position: 50-435
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 111

Conread position: 50-435
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 54

Conread position: 51-444
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 51-460
Cow position:
Alignm length: 419
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 171, 113

Conread position: 53-460
Cow position:
Alignm length: 409
Alignm identity: 264
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 261, 70

Conread position: 60-460
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 44

Conread position: 63-333
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 75

Conread position: 63-427
Cow position:
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 46

Conread position: 63-437
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 76

Conread position: 68-251
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 75

Conread position: 69-426
Cow position:
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 74-325
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 48

Conread position: 77-427
Cow position:
Alignm length: 354
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 121

Conread position: 102-403
Cow position:
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 96

Conread position: 112-505
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 86

Conread position: 116-516
Cow position:
Alignm length: 406
Alignm identity: 263
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 168, 31

Conread position: 131-446
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 55

Conread position: 131-462
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 30

Conread position: 138-295
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 83, 60

Conread position: 166-357
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 82

Conread position: 168-392
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 150, 22

Conread position: 178-427
Cow position:
Alignm length: 253
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 205-431
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 223-343
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 42

Conread position: 223-588
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 224-588
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 228-437
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 37

Conread position: 238-402
Cow position:
Alignm length: 167
Alignm identity: 138
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 27

Conread position: 277-517
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 26

Conread position: 280-436
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 281-427
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 281-437
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 298-463
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 151

Conread position: 322-437
Cow position:
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 64

Conread position: 332-457
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 337-427
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.