Cow genome map


           Conread name:
           Ss1.1-rplun0138_i19.5
        

               Conread position:
               1-123
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               222, 61
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 187
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 58
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 47
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 59
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               224, 39
               

               Conread position:
               1-407
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 142
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 198
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 97
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 194
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 197
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 166
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 206
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 197
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 43
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               163, 122
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 27
               

               Conread position:
               1-581
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 158
               

               Conread position:
               1-588
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 88
               

               Conread position:
               2-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               222, 23
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 196
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 29
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 205
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 160
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 141
               

               Conread position:
               2-438
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 57
               

               Conread position:
               2-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 197
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 30
               

               Conread position:
               2-520
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               345
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               176, 35
               

               Conread position:
               2-576
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 131
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 137
               

               Conread position:
               3-520
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 60
               

               Conread position:
               8-377
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               8-437
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 170
               

               Conread position:
               8-437
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               8-457
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 163
               

               Conread position:
               8-527
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               9-455
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               10-460
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 35
               

               Conread position:
               11-304
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 263
               

               Conread position:
               12-410
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               276, 186
               

               Conread position:
               30-457
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 167
               

               Conread position:
               49-302
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               179, 101
               

               Conread position:
               50-500
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               57-494
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               167, 51
               

               Conread position:
               59-458
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               157, 138
               

               Conread position:
               63-520
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               78-423
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               85-410
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               93-377
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               107-463
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 91
               

               Conread position:
               118-520
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               106, 79
               

               Conread position:
               135-463
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               152-415
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               217-505
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               231-413
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               236-423
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               244-427
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               270-504
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               281-525
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 192
               

               Conread position:
               292-522
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               306-427
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               308-516
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               124, 7
               

               Conread position:
               321-431
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.