Cow genome map

Conread name: Ss1.1-rplun0138_i19.5

Conread position: 1-136
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 62

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-383
Cow position:
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 197

Conread position: 1-427
Cow position:
Alignm length: 431
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 22

Conread position: 1-427
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 197

Conread position: 1-427
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 197

Conread position: 1-436
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 146

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 179

Conread position: 1-437
Cow position:
Alignm length: 441
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 61

Conread position: 1-437
Cow position:
Alignm length: 442
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 160

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 147

Conread position: 1-452
Cow position:
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 18

Conread position: 1-461
Cow position:
Alignm length: 474
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 201

Conread position: 1-508
Cow position:
Alignm length: 516
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 118

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 27

Conread position: 1-520
Cow position:
Alignm length: 529
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 61

Conread position: 1-525
Cow position:
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 23

Conread position: 2-181
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 167, 0

Conread position: 2-398
Cow position:
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 196

Conread position: 2-426
Cow position:
Alignm length: 428
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 60

Conread position: 2-441
Cow position:
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 111

Conread position: 2-451
Cow position:
Alignm length: 453
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position:
Alignm length: 466
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 191

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position:
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 196

Conread position: 2-463
Cow position:
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 195

Conread position: 3-437
Cow position:
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 8-190
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 8-427
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 35

Conread position: 9-259
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 183, 113

Conread position: 10-214
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 11-288
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 74

Conread position: 14-463
Cow position:
Alignm length: 456
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 172

Conread position: 21-520
Cow position:
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 32-453
Cow position:
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 44-335
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 172, 93

Conread position: 44-428
Cow position:
Alignm length: 395
Alignm identity: 250
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 22

Conread position: 49-295
Cow position:
Alignm length: 251
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 140, 40

Conread position: 63-423
Cow position:
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 135

Conread position: 85-410
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 139, 99

Conread position: 92-427
Cow position:
Alignm length: 340
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 142-520
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 178, 57

Conread position: 161-437
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 165-437
Cow position:
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 166-463
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 36

Conread position: 177-431
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 23, 92

Conread position: 204-505
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 40

Conread position: 287-419
Cow position:
Alignm length: 134
Alignm identity: 113
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 287-436
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 320-457
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 129, 0

Show alignments to all cow chromosomes.