Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-138 |
| Cow position: | chr26:12659798-12659661 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-196 |
| Cow position: | chr26:21350268-21350462 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-257 |
| Cow position: | chr26:11301683-11301935 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 1-295 |
| Cow position: | chr26:20254962-20255239 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 218, 61 |
| Conread position: | 1-338 |
| Cow position: | chr26:16904669-16905001 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 1-414 |
| Cow position: | chr26:20262752-20263155 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 1-422 |
| Cow position: | chr26:15144868-15144447 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 71 |
| Conread position: | 1-427 |
| Cow position: | chr26:2198519-2198944 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-427 |
| Cow position: | chr26:2352466-2352042 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 58 |
| Conread position: | 1-427 |
| Cow position: | chr26:18854980-18855406 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-432 |
| Cow position: | chr26:30589481-30589050 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 13 |
| Conread position: | 1-436 |
| Cow position: | chr26:11254165-11253729 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr26:12588673-12588238 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr26:12574505-12574081 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 148 |
| Conread position: | 1-448 |
| Cow position: | chr26:3691698-3692131 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 2-164 |
| Cow position: | chr26:6850281-6850120 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 2-208 |
| Cow position: | chr26:11536939-11536738 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-427 |
| Cow position: | chr26:8869770-8870200 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 83 |
| Conread position: | 2-431 |
| Cow position: | chr26:5675062-5675480 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 67 |
| Conread position: | 2-431 |
| Cow position: | chr26:12656187-12656593 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 2-435 |
| Cow position: | chr26:9563465-9563031 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr26:17397037-17396576 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 102 |
| Conread position: | 2-463 |
| Cow position: | chr26:19351620-19351159 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 4-175 |
| Cow position: | chr26:9845717-9845548 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-437 |
| Cow position: | chr26:4605286-4604860 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 57 |
| Conread position: | 5-508 |
| Cow position: | chr26:8283150-8282663 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 20 |
| Conread position: | 23-427 |
| Cow position: | chr26:3030916-3030511 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 175 |
| Conread position: | 45-499 |
| Cow position: | chr26:12025620-12025170 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 214, 13 |
| Conread position: | 51-427 |
| Cow position: | chr26:30782686-30783061 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 77-441 |
| Cow position: | chr26:8918818-8919181 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 93 |
| Conread position: | 101-427 |
| Cow position: | chr26:18852211-18852537 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 125-395 |
| Cow position: | chr26:23603751-23603481 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 125-436 |
| Cow position: | chr26:9112753-9113065 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 125-516 |
| Cow position: | chr26:12666123-12666508 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 131-508 |
| Cow position: | chr26:11285910-11286283 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 131-573 |
| Cow position: | chr26:9845555-9845131 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 136-362 |
| Cow position: | chr26:4334169-4334398 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 137-525 |
| Cow position: | chr26:9849896-9849510 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 137-525 |
| Cow position: | chr26:9853406-9853021 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 152-427 |
| Cow position: | chr26:4806499-4806243 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 152-431 |
| Cow position: | chr26:6849394-6849116 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 218-425 |
| Cow position: | chr26:23043248-23043454 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 292-463 |
| Cow position: | chr26:20255382-20255546 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 76 |
Show alignments to all cow chromosomes.