Cow genome map
Conread name: | Ss1.1-rplun0138_i19.5 |
Conread position: | 1-145 |
Cow position: | chr28:2989811-2989672 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 1-147 |
Cow position: | chr28:15681762-15681906 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 1-263 |
Cow position: | chr28:24652164-24652420 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 212, 137 |
Conread position: | 1-289 |
Cow position: | chr28:26426401-26426117 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 133 |
Conread position: | 1-291 |
Cow position: | chr28:15950854-15951142 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 103 |
Conread position: | 1-393 |
Cow position: | chr28:15920593-15920199 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 197 |
Conread position: | 1-427 |
Cow position: | chr28:1953003-1953429 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 140 |
Conread position: | 1-427 |
Cow position: | chr28:6780456-6780034 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 46 |
Conread position: | 1-427 |
Cow position: | chr28:7822130-7822557 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 197 |
Conread position: | 1-427 |
Cow position: | chr28:14750421-14750846 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 124 |
Conread position: | 1-427 |
Cow position: | chr28:24587306-24587734 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 198 |
Conread position: | 1-431 |
Cow position: | chr28:782268-782697 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 142 |
Conread position: | 1-436 |
Cow position: | chr28:9155412-9154977 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 61 |
Conread position: | 1-436 |
Cow position: | chr28:13441004-13440568 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 197 |
Conread position: | 1-437 |
Cow position: | chr28:9954009-9954442 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 44 |
Conread position: | 1-449 |
Cow position: | chr28:24667453-24667900 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 85 |
Conread position: | 1-451 |
Cow position: | chr28:2591789-2592235 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 61 |
Conread position: | 1-455 |
Cow position: | chr28:7901224-7901691 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 61 |
Conread position: | 1-588 |
Cow position: | chr28:5812581-5813139 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 62 |
Conread position: | 2-120 |
Cow position: | chr28:5752003-5751884 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 2-155 |
Cow position: | chr28:15035622-15035470 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 2-404 |
Cow position: | chr28:5565735-5566130 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 197 |
Conread position: | 2-411 |
Cow position: | chr28:1504729-1505135 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 34 |
Conread position: | 2-426 |
Cow position: | chr28:5114926-5114513 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 189 |
Conread position: | 2-431 |
Cow position: | chr28:7740367-7740783 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 34 |
Conread position: | 2-431 |
Cow position: | chr28:8378438-8378871 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-431 |
Cow position: | chr28:10582112-10581682 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-431 |
Cow position: | chr28:15378118-15377690 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-431 |
Cow position: | chr28:17388355-17388784 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-447 |
Cow position: | chr28:7001862-7002311 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 191 |
Conread position: | 2-463 |
Cow position: | chr28:2083478-2083930 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 60 |
Conread position: | 2-463 |
Cow position: | chr28:13459845-13460306 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 60 |
Conread position: | 2-463 |
Cow position: | chr28:14705798-14705335 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-463 |
Cow position: | chr28:22261277-22260815 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 196 |
Conread position: | 2-463 |
Cow position: | chr28:32792505-32792044 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 60 |
Conread position: | 2-463 |
Cow position: | chr28:33252191-33252648 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 82 |
Conread position: | 2-578 |
Cow position: | chr28:7790424-7789836 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 61 |
Conread position: | 2-584 |
Cow position: | chr28:21358888-21359457 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 42 |
Conread position: | 3-181 |
Cow position: | chr28:17330648-17330474 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 96, 33 |
Conread position: | 3-557 |
Cow position: | chr28:21325664-21326209 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 79 |
Conread position: | 8-404 |
Cow position: | chr28:17667634-17667237 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 190 |
Conread position: | 8-431 |
Cow position: | chr28:3192911-3192489 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 132 |
Conread position: | 8-437 |
Cow position: | chr28:9137169-9136743 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 54 |
Conread position: | 8-437 |
Cow position: | chr28:18520581-18520150 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 158 |
Conread position: | 8-463 |
Cow position: | chr28:1814988-1814531 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 190 |
Conread position: | 8-463 |
Cow position: | chr28:12150195-12150639 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 42 |
Conread position: | 9-424 |
Cow position: | chr28:8721568-8721153 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 190 |
Conread position: | 9-437 |
Cow position: | chr28:1387514-1387091 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 189 |
Conread position: | 9-557 |
Cow position: | chr28:10619225-10618695 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 27 |
Conread position: | 9-581 |
Cow position: | chr28:34648824-34649401 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 115 |
Conread position: | 23-228 |
Cow position: | chr28:22233794-22233591 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 26-453 |
Cow position: | chr28:2724993-2724567 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 134 |
Conread position: | 49-431 |
Cow position: | chr28:12410299-12409923 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 13 |
Conread position: | 49-437 |
Cow position: | chr28:5378393-5378771 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 249 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 175, 86 |
Conread position: | 65-410 |
Cow position: | chr28:12233060-12232719 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 250 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 31, 74 |
Conread position: | 77-437 |
Cow position: | chr28:4380890-4380535 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 104 |
Conread position: | 104-463 |
Cow position: | chr28:5751730-5751369 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 5 |
Conread position: | 105-423 |
Cow position: | chr28:22065760-22065448 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 228 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 118, 56 |
Conread position: | 111-463 |
Cow position: | chr28:1167899-1167545 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 87 |
Conread position: | 111-463 |
Cow position: | chr28:34593961-34594315 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 87 |
Conread position: | 130-431 |
Cow position: | chr28:29819735-29820036 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 68 |
Conread position: | 132-450 |
Cow position: | chr28:567965-568276 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 211 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 92, 15 |
Conread position: | 161-503 |
Cow position: | chr28:2846140-2845805 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 37 |
Conread position: | 166-560 |
Cow position: | chr28:5797470-5797865 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 32 |
Conread position: | 166-576 |
Cow position: | chr28:2989678-2989259 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 168-463 |
Cow position: | chr28:18181110-18180819 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 203 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 56, 30 |
Conread position: | 172-437 |
Cow position: | chr28:1931941-1931673 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 26 |
Conread position: | 176-410 |
Cow position: | chr28:5800672-5800902 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 163 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 46, 7 |
Conread position: | 178-436 |
Cow position: | chr28:17324301-17324036 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 21 |
Conread position: | 181-389 |
Cow position: | chr28:18101891-18101684 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 194-542 |
Cow position: | chr28:17312009-17312338 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 225 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 98 |
Conread position: | 200-521 |
Cow position: | chr28:10463082-10462757 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 224 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 26, 68 |
Conread position: | 213-452 |
Cow position: | chr28:485479-485239 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 54 |
Conread position: | 217-395 |
Cow position: | chr28:22828103-22828283 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 26 |
Conread position: | 229-457 |
Cow position: | chr28:15682222-15682443 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 87, 31 |
Conread position: | 232-431 |
Cow position: | chr28:22233293-22233097 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 159 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 232-588 |
Cow position: | chr28:10071089-10071434 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 33 |
Conread position: | 237-508 |
Cow position: | chr28:29092875-29092612 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 82, 30 |
Conread position: | 254-427 |
Cow position: | chr28:13490277-13490450 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 144 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 60, 11 |
Conread position: | 256-451 |
Cow position: | chr28:5937609-5937796 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 59, 9 |
Conread position: | 266-436 |
Cow position: | chr28:6539124-6538953 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 136 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 267-436 |
Cow position: | chr28:30805549-30805379 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 139 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 289-463 |
Cow position: | chr28:26426091-26425915 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 26, 153 |
Conread position: | 303-437 |
Cow position: | chr28:24652942-24652807 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 114 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 322-518 |
Cow position: | chr28:11357519-11357326 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 367-585 |
Cow position: | chr28:7817378-7817600 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 155 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 69, 104 |
Conread position: | 380-578 |
Cow position: | chr28:5764499-5764696 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 135 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.