Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-147 |
| Cow position: | chr3:17952118-17952264 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr3:19938670-19938825 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-220 |
| Cow position: | chr3:72704954-72705172 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 1-245 |
| Cow position: | chr3:4285642-4285887 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-246 |
| Cow position: | chr3:63005392-63005144 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 181, 199 |
| Conread position: | 1-275 |
| Cow position: | chr3:80871660-80871925 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 223, 41 |
| Conread position: | 1-277 |
| Cow position: | chr3:14634355-14634081 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 160 |
| Conread position: | 1-298 |
| Cow position: | chr3:37968837-37969132 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 58 |
| Conread position: | 1-313 |
| Cow position: | chr3:21945648-21945341 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 1-337 |
| Cow position: | chr3:46678156-46677821 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 61 |
| Conread position: | 1-343 |
| Cow position: | chr3:54864942-54864600 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 1-347 |
| Cow position: | chr3:57856493-57856840 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-360 |
| Cow position: | chr3:17775855-17776201 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 223, 64 |
| Conread position: | 1-363 |
| Cow position: | chr3:17828893-17828530 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-366 |
| Cow position: | chr3:32146334-32145970 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-386 |
| Cow position: | chr3:5047427-5047042 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 21 |
| Conread position: | 1-393 |
| Cow position: | chr3:15989279-15988878 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-404 |
| Cow position: | chr3:53410673-53411068 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 165 |
| Conread position: | 1-412 |
| Cow position: | chr3:70083889-70083486 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 148 |
| Conread position: | 1-422 |
| Cow position: | chr3:64650388-64650804 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 121 |
| Conread position: | 1-427 |
| Cow position: | chr3:6782144-6782567 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 174 |
| Conread position: | 1-427 |
| Cow position: | chr3:7168552-7168975 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 124 |
| Conread position: | 1-427 |
| Cow position: | chr3:18859176-18859597 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 1-427 |
| Cow position: | chr3:22335649-22336071 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr3:41211981-41211554 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr3:45032498-45032924 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 97 |
| Conread position: | 1-427 |
| Cow position: | chr3:46861541-46861120 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 35 |
| Conread position: | 1-427 |
| Cow position: | chr3:49614220-49613794 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 71 |
| Conread position: | 1-427 |
| Cow position: | chr3:56321074-56321498 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 63 |
| Conread position: | 1-431 |
| Cow position: | chr3:47081901-47081471 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 71 |
| Conread position: | 1-431 |
| Cow position: | chr3:66638496-66638926 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-431 |
| Cow position: | chr3:66891205-66890776 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-433 |
| Cow position: | chr3:3522771-3523210 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 203 |
| Conread position: | 1-436 |
| Cow position: | chr3:3806112-3806519 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 64 |
| Conread position: | 1-436 |
| Cow position: | chr3:24314235-24314662 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 165 |
| Conread position: | 1-436 |
| Cow position: | chr3:36117432-36117855 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr3:45869453-45869026 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-436 |
| Cow position: | chr3:64028329-64027894 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr3:207403-206968 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 50 |
| Conread position: | 1-437 |
| Cow position: | chr3:472290-472725 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-437 |
| Cow position: | chr3:2633685-2634113 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-437 |
| Cow position: | chr3:2653864-2654295 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 61 |
| Conread position: | 1-437 |
| Cow position: | chr3:5829872-5829436 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr3:9716570-9717003 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr3:31354500-31354072 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-437 |
| Cow position: | chr3:51940658-51940232 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 1-437 |
| Cow position: | chr3:57499762-57499353 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 1-437 |
| Cow position: | chr3:66119413-66119848 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-437 |
| Cow position: | chr3:77474517-77474955 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 1-438 |
| Cow position: | chr3:19878419-19878851 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 97 |
| Conread position: | 1-455 |
| Cow position: | chr3:34396296-34395874 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 73 |
| Conread position: | 1-457 |
| Cow position: | chr3:42580208-42579756 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 12 |
| Conread position: | 1-457 |
| Cow position: | chr3:55229937-55229486 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-466 |
| Cow position: | chr3:60210421-60209961 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 123 |
| Conread position: | 1-467 |
| Cow position: | chr3:36127148-36127616 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 1-473 |
| Cow position: | chr3:7158974-7158508 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 91 |
| Conread position: | 1-489 |
| Cow position: | chr3:24591870-24591389 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 82 |
| Conread position: | 1-504 |
| Cow position: | chr3:3054366-3054853 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 32 |
| Conread position: | 1-516 |
| Cow position: | chr3:3980142-3980660 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 1-516 |
| Cow position: | chr3:49333156-49333654 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 223, 118 |
| Conread position: | 1-520 |
| Cow position: | chr3:45775318-45774823 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 104 |
| Conread position: | 1-521 |
| Cow position: | chr3:14754539-14754022 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 61 |
| Conread position: | 1-521 |
| Cow position: | chr3:56097292-56097794 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 100 |
| Conread position: | 1-525 |
| Cow position: | chr3:4027030-4027554 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-558 |
| Cow position: | chr3:6685218-6685760 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 50 |
| Conread position: | 1-559 |
| Cow position: | chr3:48231233-48230692 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 31 |
| Conread position: | 1-560 |
| Cow position: | chr3:64358409-64357853 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 101 |
| Conread position: | 2-171 |
| Cow position: | chr3:56650511-56650342 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-343 |
| Cow position: | chr3:43039935-43039607 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 120 |
| Conread position: | 2-353 |
| Cow position: | chr3:38866159-38866504 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 60 |
| Conread position: | 2-387 |
| Cow position: | chr3:66990561-66990929 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 21 |
| Conread position: | 2-391 |
| Cow position: | chr3:23291647-23291256 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 41 |
| Conread position: | 2-395 |
| Cow position: | chr3:18357128-18356737 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 2-400 |
| Cow position: | chr3:50915063-50915462 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 90 |
| Conread position: | 2-410 |
| Cow position: | chr3:19943822-19944216 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 58 |
| Conread position: | 2-411 |
| Cow position: | chr3:5883298-5883706 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 196 |
| Conread position: | 2-427 |
| Cow position: | chr3:42431993-42432414 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 33 |
| Conread position: | 2-427 |
| Cow position: | chr3:56340666-56340244 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 58 |
| Conread position: | 2-431 |
| Cow position: | chr3:19757202-19756773 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr3:21182927-21182501 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 118 |
| Conread position: | 2-431 |
| Cow position: | chr3:21305408-21304996 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 24 |
| Conread position: | 2-431 |
| Cow position: | chr3:36882157-36881736 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 2-431 |
| Cow position: | chr3:40823146-40823573 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-435 |
| Cow position: | chr3:17936306-17935872 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 220, 29 |
| Conread position: | 2-436 |
| Cow position: | chr3:59861123-59861557 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-450 |
| Cow position: | chr3:594336-594780 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 120 |
| Conread position: | 2-454 |
| Cow position: | chr3:10239406-10239857 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-456 |
| Cow position: | chr3:18463828-18463382 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-458 |
| Cow position: | chr3:53515376-53515828 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 66 |
| Conread position: | 2-460 |
| Cow position: | chr3:5954429-5953970 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-460 |
| Cow position: | chr3:57484966-57484514 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 34 |
| Conread position: | 2-463 |
| Cow position: | chr3:18542650-18542188 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 112 |
| Conread position: | 2-463 |
| Cow position: | chr3:18811260-18811713 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 179 |
| Conread position: | 2-463 |
| Cow position: | chr3:66619936-66620392 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 141 |
| Conread position: | 2-463 |
| Cow position: | chr3:69933155-69933614 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 2-463 |
| Cow position: | chr3:72629826-72630289 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr3:78027653-78027190 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-515 |
| Cow position: | chr3:36098947-36098447 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 93 |
| Conread position: | 2-588 |
| Cow position: | chr3:29594961-29595535 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 3-138 |
| Cow position: | chr3:39326446-39326581 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-427 |
| Cow position: | chr3:2917221-2917644 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 59 |
| Conread position: | 3-434 |
| Cow position: | chr3:54785523-54785946 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 141 |
| Conread position: | 3-454 |
| Cow position: | chr3:50128120-50127671 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 3-457 |
| Cow position: | chr3:26949273-26949725 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 3-463 |
| Cow position: | chr3:48061070-48060612 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 17 |
| Conread position: | 3-527 |
| Cow position: | chr3:63241976-63241465 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 299, 40 |
| Conread position: | 4-168 |
| Cow position: | chr3:57900975-57901138 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 4-437 |
| Cow position: | chr3:31898212-31897784 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 57 |
| Conread position: | 4-454 |
| Cow position: | chr3:58947215-58947665 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 5-312 |
| Cow position: | chr3:65583853-65583558 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 219, 11 |
| Conread position: | 5-382 |
| Cow position: | chr3:29327218-29326842 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 8-431 |
| Cow position: | chr3:5995933-5995511 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 189 |
| Conread position: | 8-431 |
| Cow position: | chr3:34031133-34030713 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 28 |
| Conread position: | 8-431 |
| Cow position: | chr3:64017600-64017179 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 8-436 |
| Cow position: | chr3:47179440-47179011 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 191 |
| Conread position: | 8-441 |
| Cow position: | chr3:18729368-18728945 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 216, 96 |
| Conread position: | 8-463 |
| Cow position: | chr3:75041403-75040950 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 175 |
| Conread position: | 8-518 |
| Cow position: | chr3:54783304-54783819 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 162 |
| Conread position: | 9-459 |
| Cow position: | chr3:32842662-32842234 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 18 |
| Conread position: | 9-489 |
| Cow position: | chr3:15178075-15178556 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 9-509 |
| Cow position: | chr3:42630778-42631277 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 9-588 |
| Cow position: | chr3:19802424-19802992 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 189 |
| Conread position: | 10-417 |
| Cow position: | chr3:2711195-2710789 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 138 |
| Conread position: | 11-501 |
| Cow position: | chr3:28929868-28929386 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 175, 81 |
| Conread position: | 14-263 |
| Cow position: | chr3:13274169-13273917 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 23-427 |
| Cow position: | chr3:32623244-32622854 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 175 |
| Conread position: | 28-468 |
| Cow position: | chr3:30314350-30314783 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 41-436 |
| Cow position: | chr3:60083831-60083443 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 51-423 |
| Cow position: | chr3:30929466-30929822 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 157, 86 |
| Conread position: | 53-440 |
| Cow position: | chr3:16866971-16866577 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 57-446 |
| Cow position: | chr3:26822681-26822307 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 84 |
| Conread position: | 65-320 |
| Cow position: | chr3:49276298-49276045 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 75-525 |
| Cow position: | chr3:34093613-34093166 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 75-588 |
| Cow position: | chr3:52864641-52864126 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 11 |
| Conread position: | 77-467 |
| Cow position: | chr3:23214229-23213838 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 121 |
| Conread position: | 92-263 |
| Cow position: | chr3:6189056-6189234 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 92-454 |
| Cow position: | chr3:77423528-77423882 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 106 |
| Conread position: | 93-431 |
| Cow position: | chr3:14439911-14439573 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 5 |
| Conread position: | 101-435 |
| Cow position: | chr3:83234268-83233938 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 101-463 |
| Cow position: | chr3:49137684-49137319 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 104-404 |
| Cow position: | chr3:13518422-13518134 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 94 |
| Conread position: | 109-455 |
| Cow position: | chr3:49677651-49677997 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 90 |
| Conread position: | 109-541 |
| Cow position: | chr3:39326583-39327012 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 125-541 |
| Cow position: | chr3:2908474-2908071 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 129-447 |
| Cow position: | chr3:40157621-40157307 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 130-437 |
| Cow position: | chr3:45895673-45895365 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 130-437 |
| Cow position: | chr3:45974382-45974690 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 130-463 |
| Cow position: | chr3:49545322-49544987 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 143-513 |
| Cow position: | chr3:19891082-19890721 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 144-427 |
| Cow position: | chr3:68873848-68873572 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 144-436 |
| Cow position: | chr3:68700070-68699781 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 152-514 |
| Cow position: | chr3:49162604-49162962 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 185-436 |
| Cow position: | chr3:36864419-36864167 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 188-457 |
| Cow position: | chr3:24642735-24642996 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 188-505 |
| Cow position: | chr3:16073079-16073386 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 224-427 |
| Cow position: | chr3:19938865-19939067 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 251-585 |
| Cow position: | chr3:63004726-63004404 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 256-455 |
| Cow position: | chr3:29331265-29331065 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 262-578 |
| Cow position: | chr3:14632681-14632369 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 279-437 |
| Cow position: | chr3:7481198-7481039 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 281-427 |
| Cow position: | chr3:53713084-53713231 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 287-427 |
| Cow position: | chr3:40340070-40339929 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 321-423 |
| Cow position: | chr3:37969124-37969226 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-560 |
| Cow position: | chr3:66990924-66991078 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.