Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-198 |
| Cow position: | chr5:51771690-51771493 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 1-215 |
| Cow position: | chr5:27569806-27570023 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 164 |
| Conread position: | 1-238 |
| Cow position: | chr5:10844219-10843981 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-241 |
| Cow position: | chr5:7811896-7811659 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 215, 114 |
| Conread position: | 1-256 |
| Cow position: | chr5:27683114-27682859 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-268 |
| Cow position: | chr5:53714909-53715176 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 160 |
| Conread position: | 1-282 |
| Cow position: | chr5:6188223-6188497 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-323 |
| Cow position: | chr5:25207086-25206762 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 1-325 |
| Cow position: | chr5:4088460-4088785 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-326 |
| Cow position: | chr5:18665617-18665940 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-392 |
| Cow position: | chr5:61273524-61273140 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-404 |
| Cow position: | chr5:61020193-61019790 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 1-412 |
| Cow position: | chr5:24329954-24330341 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 99 |
| Conread position: | 1-412 |
| Cow position: | chr5:26090170-26089765 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 1-423 |
| Cow position: | chr5:45182454-45182025 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 197 |
| Conread position: | 1-423 |
| Cow position: | chr5:46775744-46776158 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 68 |
| Conread position: | 1-426 |
| Cow position: | chr5:46663654-46664084 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 214 |
| Conread position: | 1-427 |
| Cow position: | chr5:2530926-2531353 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:3964126-3964534 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-427 |
| Cow position: | chr5:4019543-4019116 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:6589366-6588938 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:14379818-14380244 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:27909615-27909190 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 184 |
| Conread position: | 1-427 |
| Cow position: | chr5:31706230-31706656 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 198 |
| Conread position: | 1-427 |
| Cow position: | chr5:32772137-32772564 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:47831449-47831031 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 197 |
| Conread position: | 1-427 |
| Cow position: | chr5:54932562-54932136 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 139 |
| Conread position: | 1-427 |
| Cow position: | chr5:58195658-58196084 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 13 |
| Conread position: | 1-432 |
| Cow position: | chr5:32733589-32733166 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 38 |
| Conread position: | 1-436 |
| Cow position: | chr5:24576569-24577006 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 198 |
| Conread position: | 1-436 |
| Cow position: | chr5:26079563-26079127 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr5:29042167-29042604 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr5:44459138-44459574 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr5:48468621-48468188 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-436 |
| Cow position: | chr5:59481910-59482344 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 172 |
| Conread position: | 1-437 |
| Cow position: | chr5:9686758-9686335 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 67 |
| Conread position: | 1-437 |
| Cow position: | chr5:29009015-29009445 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 1-437 |
| Cow position: | chr5:39165142-39164708 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 142 |
| Conread position: | 1-437 |
| Cow position: | chr5:41551269-41550834 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 53 |
| Conread position: | 1-437 |
| Cow position: | chr5:45699940-45700358 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 12 |
| Conread position: | 1-437 |
| Cow position: | chr5:49181929-49182361 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 1-440 |
| Cow position: | chr5:34202602-34203030 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 34 |
| Conread position: | 1-452 |
| Cow position: | chr5:59060276-59060724 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-457 |
| Cow position: | chr5:28031140-28031590 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 36 |
| Conread position: | 1-459 |
| Cow position: | chr5:41962579-41962125 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 42 |
| Conread position: | 1-497 |
| Cow position: | chr5:39417263-39417760 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 308 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 1-508 |
| Cow position: | chr5:26069058-26068566 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 135 |
| Conread position: | 1-508 |
| Cow position: | chr5:41529916-41529428 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 138 |
| Conread position: | 1-518 |
| Cow position: | chr5:51162571-51163075 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 42 |
| Conread position: | 1-520 |
| Cow position: | chr5:25000992-25000476 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 1-578 |
| Cow position: | chr5:46659387-46659947 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 118 |
| Conread position: | 1-588 |
| Cow position: | chr5:49593801-49593213 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 2-246 |
| Cow position: | chr5:34696241-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 2-261 |
| Cow position: | chr5:46005727-46005460 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 203 |
| Conread position: | 2-388 |
| Cow position: | chr5:1342137-1341755 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-391 |
| Cow position: | chr5:6158540-6158152 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 202 |
| Conread position: | 2-395 |
| Cow position: | chr5:3504590-3504200 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 120 |
| Conread position: | 2-422 |
| Cow position: | chr5:2430476-2430055 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr5:3785465-3785870 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 2-431 |
| Cow position: | chr5:30578979-30579407 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 117 |
| Conread position: | 2-431 |
| Cow position: | chr5:37732002-37732431 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr5:49518320-49518743 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 2-433 |
| Cow position: | chr5:32674085-32673652 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 7 |
| Conread position: | 2-437 |
| Cow position: | chr5:32945537-32945966 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 39 |
| Conread position: | 2-437 |
| Cow position: | chr5:49119625-49119189 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 2-439 |
| Cow position: | chr5:46644357-46644783 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 2-460 |
| Cow position: | chr5:416066-415607 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 2-460 |
| Cow position: | chr5:4068647-4069103 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 26 |
| Conread position: | 2-463 |
| Cow position: | chr5:7273518-7273947 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-463 |
| Cow position: | chr5:24098305-24098768 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr5:48809059-48808596 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr5:57482890-57482427 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr5:64782360-64781899 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-465 |
| Cow position: | chr5:10918454-10918916 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 191 |
| Conread position: | 2-497 |
| Cow position: | chr5:53627102-53626614 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 94, 60 |
| Conread position: | 3-457 |
| Cow position: | chr5:28006863-28007304 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 37 |
| Conread position: | 4-437 |
| Cow position: | chr5:27652319-27651890 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 32 |
| Conread position: | 5-312 |
| Cow position: | chr5:57366362-57366058 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 219, 193 |
| Conread position: | 5-520 |
| Cow position: | chr5:56858037-56857546 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 8-419 |
| Cow position: | chr5:28335169-28334751 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 177, 132 |
| Conread position: | 8-431 |
| Cow position: | chr5:2914113-2914533 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 190 |
| Conread position: | 8-463 |
| Cow position: | chr5:54792955-54792516 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 112 |
| Conread position: | 8-504 |
| Cow position: | chr5:14346711-14346222 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 139, 21 |
| Conread position: | 9-174 |
| Cow position: | chr5:4384890-4385055 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-277 |
| Cow position: | chr5:58061173-58060909 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 215, 47 |
| Conread position: | 9-408 |
| Cow position: | chr5:31101932-31101548 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 104 |
| Conread position: | 9-412 |
| Cow position: | chr5:41933152-41932763 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 9-457 |
| Cow position: | chr5:26769474-26769916 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 176 |
| Conread position: | 10-457 |
| Cow position: | chr5:46738920-46738476 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 151 |
| Conread position: | 23-353 |
| Cow position: | chr5:58819957-58819626 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 175 |
| Conread position: | 24-518 |
| Cow position: | chr5:47073586-47074064 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 172, 47 |
| Conread position: | 31-551 |
| Cow position: | chr5:52433662-52434172 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 32 |
| Conread position: | 39-343 |
| Cow position: | chr5:5318063-5317759 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 122 |
| Conread position: | 39-431 |
| Cow position: | chr5:55627685-55628071 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 69 |
| Conread position: | 41-426 |
| Cow position: | chr5:10776569-10776183 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 157 |
| Conread position: | 44-437 |
| Cow position: | chr5:14659395-14659011 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 81 |
| Conread position: | 45-350 |
| Cow position: | chr5:18653741-18654050 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 49-422 |
| Cow position: | chr5:51319542-51319175 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 54-434 |
| Cow position: | chr5:28022869-28023242 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 77-520 |
| Cow position: | chr5:46630707-46630275 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 24 |
| Conread position: | 86-302 |
| Cow position: | chr5:52805105-52805322 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 94-399 |
| Cow position: | chr5:23755873-23755565 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 100-437 |
| Cow position: | chr5:20972278-20971954 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 98 |
| Conread position: | 101-324 |
| Cow position: | chr5:55096953-55096733 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 107-441 |
| Cow position: | chr5:24108825-24108502 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 110, 8 |
| Conread position: | 114-505 |
| Cow position: | chr5:49128984-49129378 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 116-382 |
| Cow position: | chr5:5786829-5786570 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 107, 45 |
| Conread position: | 124-508 |
| Cow position: | chr5:31202839-31202464 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 125-300 |
| Cow position: | chr5:27060465-27060294 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 127-454 |
| Cow position: | chr5:57977037-57977363 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 137-434 |
| Cow position: | chr5:27001403-27001696 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 138-463 |
| Cow position: | chr5:73489769-73489442 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 152-410 |
| Cow position: | chr5:29436163-29435902 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 161-522 |
| Cow position: | chr5:27489063-27489424 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 182-417 |
| Cow position: | chr5:76123738-76123509 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 183-497 |
| Cow position: | chr5:62848412-62848710 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 183-504 |
| Cow position: | chr5:51771461-51771135 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 194-437 |
| Cow position: | chr5:12644091-12643839 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 197-452 |
| Cow position: | chr5:17774190-17773934 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 198-437 |
| Cow position: | chr5:4385108-4385338 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 219-436 |
| Cow position: | chr5:47826274-47826060 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 224-503 |
| Cow position: | chr5:41574708-41574985 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 232-437 |
| Cow position: | chr5:27570000-27570203 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 233-437 |
| Cow position: | chr5:34696490-34696695 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 242-427 |
| Cow position: | chr5:10843522-10843337 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 256-436 |
| Cow position: | chr5:9042949-9043129 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 257-453 |
| Cow position: | chr5:18271519-18271714 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 265-427 |
| Cow position: | chr5:23960396-23960233 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 265-521 |
| Cow position: | chr5:27682825-27682563 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 279-441 |
| Cow position: | chr5:25206759-25206588 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 283-522 |
| Cow position: | chr5:23228168-23228402 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 292-525 |
| Cow position: | chr5:27059178-27058942 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 292-525 |
| Cow position: | chr5:27060081-27059845 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 297-436 |
| Cow position: | chr5:10482801-10482939 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 305-436 |
| Cow position: | chr5:18665953-18666085 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 307-437 |
| Cow position: | chr5:6611972-6612103 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 312-588 |
| Cow position: | chr5:40053426-40053681 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 314-427 |
| Cow position: | chr5:18122499-18122386 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 327-436 |
| Cow position: | chr5:56145039-56144930 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-427 |
| Cow position: | chr5:35299836-35299935 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-436 |
| Cow position: | chr5:4089054-4089162 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.