Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-126 |
| Cow position: | chr6:45672062-45672187 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-127 |
| Cow position: | chr6:65007635-65007758 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 1-139 |
| Cow position: | chr6:6476656-6476519 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-161 |
| Cow position: | chr6:13978320-13978478 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 151, 61 |
| Conread position: | 1-276 |
| Cow position: | chr6:68362522-68362250 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 1-359 |
| Cow position: | chr6:57870206-57869847 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 119 |
| Conread position: | 1-374 |
| Cow position: | chr6:42927182-42927553 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 43 |
| Conread position: | 1-384 |
| Cow position: | chr6:48368191-48368556 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 222, 61 |
| Conread position: | 1-386 |
| Cow position: | chr6:11277903-11277513 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 168 |
| Conread position: | 1-422 |
| Cow position: | chr6:28063135-28063555 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-422 |
| Cow position: | chr6:41552819-41553229 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 95, 168 |
| Conread position: | 1-422 |
| Cow position: | chr6:65822329-65821907 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-423 |
| Cow position: | chr6:7141674-7141267 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 198 |
| Conread position: | 1-423 |
| Cow position: | chr6:17598482-17598059 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-423 |
| Cow position: | chr6:26671066-26670638 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-423 |
| Cow position: | chr6:44028845-44029259 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-427 |
| Cow position: | chr6:331668-331245 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 30 |
| Conread position: | 1-427 |
| Cow position: | chr6:1405439-1405014 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 103 |
| Conread position: | 1-427 |
| Cow position: | chr6:2374501-2374924 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 140 |
| Conread position: | 1-427 |
| Cow position: | chr6:2554505-2554930 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 179 |
| Conread position: | 1-427 |
| Cow position: | chr6:13276600-13277024 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 169 |
| Conread position: | 1-427 |
| Cow position: | chr6:13846845-13847256 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 143 |
| Conread position: | 1-427 |
| Cow position: | chr6:16051684-16052104 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 97 |
| Conread position: | 1-427 |
| Cow position: | chr6:27169374-27169805 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 1-427 |
| Cow position: | chr6:34127146-34127577 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 201 |
| Conread position: | 1-427 |
| Cow position: | chr6:43617514-43617939 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 160 |
| Conread position: | 1-427 |
| Cow position: | chr6:58409115-58408688 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr6:68026579-68027016 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 207 |
| Conread position: | 1-436 |
| Cow position: | chr6:13943709-13944142 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 39 |
| Conread position: | 1-437 |
| Cow position: | chr6:10558858-10558426 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 15 |
| Conread position: | 1-437 |
| Cow position: | chr6:19453720-19454149 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 198 |
| Conread position: | 1-437 |
| Cow position: | chr6:24238862-24239299 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-437 |
| Cow position: | chr6:33388631-33389076 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 160 |
| Conread position: | 1-437 |
| Cow position: | chr6:44150760-44150323 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 198 |
| Conread position: | 1-451 |
| Cow position: | chr6:15476079-15476535 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 74, 125 |
| Conread position: | 1-456 |
| Cow position: | chr6:65900121-65899647 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 281 |
| Conread position: | 1-504 |
| Cow position: | chr6:11402850-11403338 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 1-508 |
| Cow position: | chr6:37642198-37642686 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 88 |
| Conread position: | 1-516 |
| Cow position: | chr6:16672183-16672693 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 1-516 |
| Cow position: | chr6:59741253-59740746 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 1-522 |
| Cow position: | chr6:1100787-1100269 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 86 |
| Conread position: | 1-525 |
| Cow position: | chr6:35420783-35420289 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 1-588 |
| Cow position: | chr6:38232073-38232660 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 202 |
| Conread position: | 2-146 |
| Cow position: | chr6:47043633-47043489 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-158 |
| Cow position: | chr6:10054412-10054567 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 2-159 |
| Cow position: | chr6:39437439-39437596 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-191 |
| Cow position: | chr6:1823451-1823264 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 2-262 |
| Cow position: | chr6:11353540-11353800 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 222, 139 |
| Conread position: | 2-404 |
| Cow position: | chr6:5951438-5951045 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 138 |
| Conread position: | 2-404 |
| Cow position: | chr6:28274782-28275183 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 139 |
| Conread position: | 2-431 |
| Cow position: | chr6:913427-913880 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 208 |
| Conread position: | 2-431 |
| Cow position: | chr6:27530204-27529780 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 76 |
| Conread position: | 2-431 |
| Cow position: | chr6:35876920-35876491 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-431 |
| Cow position: | chr6:55544528-55544100 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 117 |
| Conread position: | 2-436 |
| Cow position: | chr6:13317687-13317262 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 169 |
| Conread position: | 2-437 |
| Cow position: | chr6:6566411-6566839 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 130 |
| Conread position: | 2-437 |
| Cow position: | chr6:27469053-27469481 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 18 |
| Conread position: | 2-437 |
| Cow position: | chr6:65880665-65881101 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-446 |
| Cow position: | chr6:3488602-3488156 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-447 |
| Cow position: | chr6:17045860-17046299 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 18 |
| Conread position: | 2-447 |
| Cow position: | chr6:65927735-65928180 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 196 |
| Conread position: | 2-453 |
| Cow position: | chr6:29311289-29311738 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-457 |
| Cow position: | chr6:30478890-30479355 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 66 |
| Conread position: | 2-463 |
| Cow position: | chr6:3278152-3277690 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 191 |
| Conread position: | 2-463 |
| Cow position: | chr6:8201531-8201998 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 52 |
| Conread position: | 2-463 |
| Cow position: | chr6:8761502-8761044 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 138 |
| Conread position: | 2-463 |
| Cow position: | chr6:15141377-15140919 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 141 |
| Conread position: | 2-463 |
| Cow position: | chr6:15280743-15280291 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 26 |
| Conread position: | 2-463 |
| Cow position: | chr6:20561311-20560851 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 164 |
| Conread position: | 2-463 |
| Cow position: | chr6:34893211-34892745 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 159 |
| Conread position: | 2-466 |
| Cow position: | chr6:36525841-36526303 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 201 |
| Conread position: | 2-466 |
| Cow position: | chr6:40554794-40554326 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 181 |
| Conread position: | 2-588 |
| Cow position: | chr6:37115937-37116518 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 198 |
| Conread position: | 3-256 |
| Cow position: | chr6:50497659-50497405 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 195 |
| Conread position: | 3-427 |
| Cow position: | chr6:28491714-28491290 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 195 |
| Conread position: | 3-457 |
| Cow position: | chr6:59919479-59919029 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 195 |
| Conread position: | 4-437 |
| Cow position: | chr6:43793957-43793520 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 50 |
| Conread position: | 5-326 |
| Cow position: | chr6:49520598-49520257 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 131, 280 |
| Conread position: | 5-434 |
| Cow position: | chr6:35433345-35433761 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 219, 131 |
| Conread position: | 8-169 |
| Cow position: | chr6:65909231-65909389 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 8-282 |
| Cow position: | chr6:42723120-42722849 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 83 |
| Conread position: | 8-377 |
| Cow position: | chr6:21971478-21971860 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 190 |
| Conread position: | 8-426 |
| Cow position: | chr6:13103862-13104281 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 8-431 |
| Cow position: | chr6:30275374-30274952 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 190 |
| Conread position: | 8-433 |
| Cow position: | chr6:526048-526464 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 164, 128 |
| Conread position: | 8-458 |
| Cow position: | chr6:33459669-33460120 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 98 |
| Conread position: | 8-462 |
| Cow position: | chr6:3889675-3889225 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 153 |
| Conread position: | 8-463 |
| Cow position: | chr6:701761-702211 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 54 |
| Conread position: | 8-488 |
| Cow position: | chr6:65841399-65841862 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 189 |
| Conread position: | 10-262 |
| Cow position: | chr6:10640933-10641185 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 10-417 |
| Cow position: | chr6:66231610-66232009 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 57 |
| Conread position: | 15-453 |
| Cow position: | chr6:28106022-28105600 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 76 |
| Conread position: | 29-520 |
| Cow position: | chr6:34203337-34203832 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 327 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 44-410 |
| Cow position: | chr6:34024645-34025011 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 49-503 |
| Cow position: | chr6:32330947-32330496 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 58-517 |
| Cow position: | chr6:28474556-28475024 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 166, 135 |
| Conread position: | 64-437 |
| Cow position: | chr6:25214119-25214493 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 68-427 |
| Cow position: | chr6:1412074-1411716 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 36 |
| Conread position: | 72-496 |
| Cow position: | chr6:7179821-7179401 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 84 |
| Conread position: | 80-440 |
| Cow position: | chr6:32074859-32074498 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 92, 81 |
| Conread position: | 86-436 |
| Cow position: | chr6:7866869-7866518 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 112 |
| Conread position: | 94-450 |
| Cow position: | chr6:64715121-64715473 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 98-422 |
| Cow position: | chr6:34441013-34441340 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 105-399 |
| Cow position: | chr6:33900724-33900426 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 107-427 |
| Cow position: | chr6:3148908-3149228 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 111-352 |
| Cow position: | chr6:63198167-63197927 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 114-389 |
| Cow position: | chr6:31568887-31568619 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 116-427 |
| Cow position: | chr6:39908441-39908751 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 82 |
| Conread position: | 135-454 |
| Cow position: | chr6:47043271-47042954 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 152-332 |
| Cow position: | chr6:12092946-12092763 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 161-560 |
| Cow position: | chr6:6476525-6476138 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 163-436 |
| Cow position: | chr6:40315015-40315277 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 195-436 |
| Cow position: | chr6:6155677-6155916 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 200-395 |
| Cow position: | chr6:17099708-17099508 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 223-423 |
| Cow position: | chr6:40251683-40251883 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 257-432 |
| Cow position: | chr6:65007741-65007914 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 149, 50 |
| Conread position: | 273-554 |
| Cow position: | chr6:10641229-10641509 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 276-560 |
| Cow position: | chr6:43608286-43608005 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 38, 136 |
| Conread position: | 294-462 |
| Cow position: | chr6:1822550-1822381 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 300-398 |
| Cow position: | chr6:9738796-9738895 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 301-457 |
| Cow position: | chr6:58026855-58027010 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 139 |
| Conread position: | 304-436 |
| Cow position: | chr6:10499624-10499491 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 306-437 |
| Cow position: | chr6:52693125-52693257 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 308-436 |
| Cow position: | chr6:65914317-65914445 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 308-437 |
| Cow position: | chr6:12650845-12650715 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 328-427 |
| Cow position: | chr6:40275213-40275312 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-436 |
| Cow position: | chr6:24323255-24323148 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.