Cow genome map
| Conread name: | Ss1.1-rplun0138_i19.5 |
| Conread position: | 1-146 |
| Cow position: | chr9:1294089-1293944 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-172 |
| Cow position: | chr9:13220048-13220222 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-179 |
| Cow position: | chr9:54360330-54360506 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-207 |
| Cow position: | chr9:8969200-8968994 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 27, 198 |
| Conread position: | 1-227 |
| Cow position: | chr9:20310005-20309787 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1-263 |
| Cow position: | chr9:831707-831444 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-332 |
| Cow position: | chr9:46626072-46625741 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 137 |
| Conread position: | 1-367 |
| Cow position: | chr9:4672334-4672700 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-372 |
| Cow position: | chr9:222822-222449 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 1-372 |
| Cow position: | chr9:1252240-1251877 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 73 |
| Conread position: | 1-404 |
| Cow position: | chr9:52570387-52570780 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 44 |
| Conread position: | 1-410 |
| Cow position: | chr9:792786-792377 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 19 |
| Conread position: | 1-413 |
| Cow position: | chr9:4984501-4984911 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 59 |
| Conread position: | 1-423 |
| Cow position: | chr9:31194440-31194017 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 119 |
| Conread position: | 1-427 |
| Cow position: | chr9:131468-131036 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 8 |
| Conread position: | 1-427 |
| Cow position: | chr9:781075-780651 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 28 |
| Conread position: | 1-427 |
| Cow position: | chr9:1076472-1076044 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 192 |
| Conread position: | 1-427 |
| Cow position: | chr9:17064671-17064230 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 197 |
| Conread position: | 1-427 |
| Cow position: | chr9:27933821-27934242 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-427 |
| Cow position: | chr9:28677702-28678126 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-427 |
| Cow position: | chr9:30826408-30826835 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-428 |
| Cow position: | chr9:16268088-16268526 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 207 |
| Conread position: | 1-434 |
| Cow position: | chr9:15072243-15072674 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 173 |
| Conread position: | 1-436 |
| Cow position: | chr9:163763-163341 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 23 |
| Conread position: | 1-436 |
| Cow position: | chr9:9055339-9054903 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-436 |
| Cow position: | chr9:36724228-36724664 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 198 |
| Conread position: | 1-437 |
| Cow position: | chr9:25483600-25484038 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 197 |
| Conread position: | 1-437 |
| Cow position: | chr9:34242871-34242432 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 199 |
| Conread position: | 1-437 |
| Cow position: | chr9:37129811-37129382 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 161 |
| Conread position: | 1-437 |
| Cow position: | chr9:45873076-45873514 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 62 |
| Conread position: | 1-440 |
| Cow position: | chr9:10315094-10315533 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 161 |
| Conread position: | 1-447 |
| Cow position: | chr9:37064069-37063629 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 139 |
| Conread position: | 1-451 |
| Cow position: | chr9:34992110-34992569 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 61 |
| Conread position: | 1-454 |
| Cow position: | chr9:3586082-3586543 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 210 |
| Conread position: | 1-457 |
| Cow position: | chr9:3155759-3156204 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 160 |
| Conread position: | 1-457 |
| Cow position: | chr9:31020537-31021006 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 61 |
| Conread position: | 1-488 |
| Cow position: | chr9:6757299-6757777 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 1-508 |
| Cow position: | chr9:3356253-3355759 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 52 |
| Conread position: | 1-524 |
| Cow position: | chr9:39992646-39993162 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 149 |
| Conread position: | 1-525 |
| Cow position: | chr9:64118558-64119065 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 79 |
| Conread position: | 2-129 |
| Cow position: | chr9:32968469-32968596 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-305 |
| Cow position: | chr9:2199835-2200137 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 52 |
| Conread position: | 2-377 |
| Cow position: | chr9:28021275-28021654 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 197 |
| Conread position: | 2-397 |
| Cow position: | chr9:37163080-37162683 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 265 |
| Conread position: | 2-410 |
| Cow position: | chr9:27034435-27034836 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 19 |
| Conread position: | 2-416 |
| Cow position: | chr9:3542538-3542950 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 138 |
| Conread position: | 2-417 |
| Cow position: | chr9:47001932-47002332 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 26 |
| Conread position: | 2-426 |
| Cow position: | chr9:42309411-42309835 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 19 |
| Conread position: | 2-431 |
| Cow position: | chr9:5003741-5004155 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 19 |
| Conread position: | 2-431 |
| Cow position: | chr9:59174429-59174004 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 141 |
| Conread position: | 2-431 |
| Cow position: | chr9:59535826-59536251 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 12 |
| Conread position: | 2-431 |
| Cow position: | chr9:60278294-60277866 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-434 |
| Cow position: | chr9:3548445-3548013 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 197 |
| Conread position: | 2-436 |
| Cow position: | chr9:1996185-1995752 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-436 |
| Cow position: | chr9:25023574-25023139 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-437 |
| Cow position: | chr9:30672098-30672531 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-437 |
| Cow position: | chr9:59443580-59444013 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 147 |
| Conread position: | 2-438 |
| Cow position: | chr9:64158851-64159280 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 222, 107 |
| Conread position: | 2-460 |
| Cow position: | chr9:2170783-2171243 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 199 |
| Conread position: | 2-462 |
| Cow position: | chr9:29629019-29628565 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 196 |
| Conread position: | 2-463 |
| Cow position: | chr9:4532222-4532681 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 141 |
| Conread position: | 2-463 |
| Cow position: | chr9:6051319-6050859 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 60 |
| Conread position: | 2-463 |
| Cow position: | chr9:10321550-10321998 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 82 |
| Conread position: | 2-463 |
| Cow position: | chr9:31807265-31807723 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 2-463 |
| Cow position: | chr9:37971479-37971021 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 176 |
| Conread position: | 2-465 |
| Cow position: | chr9:42568598-42569060 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 197 |
| Conread position: | 3-384 |
| Cow position: | chr9:2052180-2052558 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 5-435 |
| Cow position: | chr9:5424455-5424023 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 5-505 |
| Cow position: | chr9:35657694-35658173 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 28 |
| Conread position: | 8-164 |
| Cow position: | chr9:2697197-2697042 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 8-245 |
| Cow position: | chr9:7002287-7002524 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 46 |
| Conread position: | 8-342 |
| Cow position: | chr9:29028495-29028158 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 191 |
| Conread position: | 8-415 |
| Cow position: | chr9:6111242-6110856 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 8-434 |
| Cow position: | chr9:3726013-3726441 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 129 |
| Conread position: | 8-455 |
| Cow position: | chr9:2185695-2186145 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 135 |
| Conread position: | 8-460 |
| Cow position: | chr9:59455865-59455412 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 99 |
| Conread position: | 8-462 |
| Cow position: | chr9:28626307-28625853 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 126 |
| Conread position: | 8-463 |
| Cow position: | chr9:16175501-16175957 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 190 |
| Conread position: | 8-508 |
| Cow position: | chr9:59482938-59482438 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 9-435 |
| Cow position: | chr9:3006511-3006084 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 189 |
| Conread position: | 9-436 |
| Cow position: | chr9:9012844-9013270 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 9-457 |
| Cow position: | chr9:2500561-2500110 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 190 |
| Conread position: | 9-495 |
| Cow position: | chr9:26002396-26001931 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 100, 114 |
| Conread position: | 10-162 |
| Cow position: | chr9:1979675-1979826 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 10-251 |
| Cow position: | chr9:6830814-6830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 214, 53 |
| Conread position: | 10-416 |
| Cow position: | chr9:3567117-3566709 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 151 |
| Conread position: | 10-431 |
| Cow position: | chr9:7062357-7061936 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 188 |
| Conread position: | 14-438 |
| Cow position: | chr9:50789417-50789844 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 184 |
| Conread position: | 23-391 |
| Cow position: | chr9:4280212-4280573 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 155, 8 |
| Conread position: | 27-281 |
| Cow position: | chr9:23409967-23410210 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 195, 105 |
| Conread position: | 28-576 |
| Cow position: | chr9:13477457-13476923 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 50-451 |
| Cow position: | chr9:37094952-37095372 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 236 |
| Conread position: | 68-427 |
| Cow position: | chr9:25755430-25755070 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 130 |
| Conread position: | 72-383 |
| Cow position: | chr9:2001605-2001298 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 70 |
| Conread position: | 75-444 |
| Cow position: | chr9:12845733-12845381 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 149, 28 |
| Conread position: | 88-459 |
| Cow position: | chr9:18836823-18837197 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 111 |
| Conread position: | 100-520 |
| Cow position: | chr9:6973954-6974372 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 122-463 |
| Cow position: | chr9:32968815-32969157 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 76 |
| Conread position: | 125-263 |
| Cow position: | chr9:829372-829233 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 126-437 |
| Cow position: | chr9:51182343-51182031 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 130-447 |
| Cow position: | chr9:1979832-1980152 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 137-366 |
| Cow position: | chr9:22410250-22410023 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 137-416 |
| Cow position: | chr9:43662824-43663087 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 146-460 |
| Cow position: | chr9:3394113-3393805 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 52 |
| Conread position: | 162-354 |
| Cow position: | chr9:34719857-34720053 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 166-436 |
| Cow position: | chr9:40191785-40191514 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 166-507 |
| Cow position: | chr9:1635445-1635772 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 181-392 |
| Cow position: | chr9:18067313-18067101 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 182-431 |
| Cow position: | chr9:54361343-54361588 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 195-432 |
| Cow position: | chr9:15683855-15684087 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 198-436 |
| Cow position: | chr9:64018537-64018297 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 199-521 |
| Cow position: | chr9:39040497-39040816 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 229-447 |
| Cow position: | chr9:22653521-22653740 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 229-580 |
| Cow position: | chr9:44817814-44818165 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 232-436 |
| Cow position: | chr9:49177869-49177665 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 237-520 |
| Cow position: | chr9:20309568-20309290 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 249-436 |
| Cow position: | chr9:31064408-31064595 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 255-437 |
| Cow position: | chr9:8968968-8968794 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 265-427 |
| Cow position: | chr9:2488141-2487977 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 273-416 |
| Cow position: | chr9:7002519-7002664 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 273-437 |
| Cow position: | chr9:18509805-18509640 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 277-427 |
| Cow position: | chr9:60651709-60651559 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-513 |
| Cow position: | chr9:3803063-3803280 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 388-588 |
| Cow position: | chr9:44794577-44794772 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 192, 46 |
Show alignments to all cow chromosomes.