Cow genome map


           Conread name:
           Ss1.1-rptbr0103_g24.5
        

               Conread position:
               3-160
               

               Cow position:
               chr12:7951962-7952118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               141
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               153-352
               

               Cow position:
               chr12:7955504-7955703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               351-523
               

               Cow position:
               chr12:7957935-7958108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               526-1197
               

               Cow position:
               chr12:7959406-7960072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               693
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 188
               

               Conread position:
               1209-1422
               

               Cow position:
               chr12:7463895-7463683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               189, 62
               

               Conread position:
               1246-1428
               

               Cow position:
               chr12:7960079-7960269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               116, 59
               
Show alignments to all cow chromosomes.