Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               163-451
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               166-520
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               173-450
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               173-462
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               174-457
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               174-462
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 90
               

               Conread position:
               174-504
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               174-523
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 157
               

               Conread position:
               176-382
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               176-528
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 150
               

               Conread position:
               179-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               179-528
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               180-453
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               181-420
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               181-420
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 145
               

               Conread position:
               181-522
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               181-525
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               182-421
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               182-432
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-507
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-515
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-523
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               184-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               184-525
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               187-420
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               187-450
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-488
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               187-488
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               187-507
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 140
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-524
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               188-514
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               188-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 138
               

               Conread position:
               188-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               188-520
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 130
               

               Conread position:
               191-451
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               198-520
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               208-520
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 101
               
Show alignments to all cow chromosomes.