Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               169-520
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               173-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               180-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-517
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 135
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 129
               

               Conread position:
               182-453
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 170
               

               Conread position:
               184-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               184-482
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               185-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               187-324
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               187-447
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-447
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-449
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               188-516
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               191-520
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               191-521
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 135
               

               Conread position:
               192-451
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 132
               

               Conread position:
               192-451
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               192-454
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               198-525
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               208-451
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 118
               
Show alignments to all cow chromosomes.