Cow genome map

Conread name: Ss1.1-rptbr0110_c10.5

Conread position: 155-520
Cow position: chr14:48148085-48148447 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 279, 20

Conread position: 166-449
Cow position: chr14:42121769-42122050 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 10

Conread position: 173-460
Cow position: chr14:29606523-29606238 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 186, 49

Conread position: 174-520
Cow position: chr14:17688656-17688303 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 136

Conread position: 175-451
Cow position: chr14:11475484-11475764 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 152

Conread position: 176-451
Cow position: chr14:41411548-41411276 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 115

Conread position: 176-525
Cow position: chr14:33490633-33490285 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 5

Conread position: 181-432
Cow position: chr14:11152106-11152362 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 146

Conread position: 181-450
Cow position: chr14:36908406-36908674 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 121

Conread position: 181-451
Cow position: chr14:32448759-32448484 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 129

Conread position: 181-451
Cow position: chr14:50113167-50112893 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 144

Conread position: 181-520
Cow position: chr14:191852-191504 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 226
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 148

Conread position: 181-520
Cow position: chr14:12741245-12741592 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr14:15273752-15274096 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 132

Conread position: 181-520
Cow position: chr14:19326460-19326808 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 146

Conread position: 181-520
Cow position: chr14:37225959-37225610 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 129

Conread position: 181-520
Cow position: chr14:48252525-48252873 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 129

Conread position: 181-522
Cow position: chr14:7474153-7473801 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 146

Conread position: 182-451
Cow position: chr14:30594553-30594825 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 127

Conread position: 182-451
Cow position: chr14:44782177-44782449 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 144

Conread position: 182-508
Cow position: chr14:43560031-43559702 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 147

Conread position: 182-520
Cow position: chr14:46221878-46221531 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 187-411
Cow position: chr14:18975891-18975663 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 141

Conread position: 187-451
Cow position: chr14:1660254-1659987 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 139

Conread position: 187-451
Cow position: chr14:22029676-22029942 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 122

Conread position: 187-513
Cow position: chr14:752357-752025 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 114

Conread position: 187-520
Cow position: chr14:16807527-16807869 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 139

Conread position: 187-520
Cow position: chr14:30582326-30582667 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 46, 139

Conread position: 188-451
Cow position: chr14:45082910-45082646 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 120

Conread position: 188-507
Cow position: chr14:46503484-46503159 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 138

Conread position: 192-451
Cow position: chr14:13780740-13780478 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 117

Conread position: 210-457
Cow position: chr14:23255587-23255837 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 99

Show alignments to all cow chromosomes.