Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               136-520
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               169-520
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               171-528
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               173-451
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               174-521
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               174-521
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 136
               

               Conread position:
               176-432
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               180-451
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               181-450
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 146
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 136
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-502
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 175
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               182-431
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 145
               

               Conread position:
               182-432
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 56
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               182-507
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 170
               

               Conread position:
               182-522
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               183-432
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 167
               

               Conread position:
               184-446
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               184-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               49, 117
               

               Conread position:
               185-528
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 111
               

               Conread position:
               187-431
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-449
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 118
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 137
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-507
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               193-463
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               196-525
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               199-520
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               208-451
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 30
               
Show alignments to all cow chromosomes.