Cow genome map

Conread name: Ss1.1-rptbr0110_c10.5

Conread position: 167-520
Cow position: chr17:40487-40124 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 143

Conread position: 173-521
Cow position: chr17:19380672-19381023 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 53

Conread position: 175-451
Cow position: chr17:2170455-2170180 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 128

Conread position: 180-432
Cow position: chr17:39050461-39050211 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 147

Conread position: 180-520
Cow position: chr17:45271085-45271435 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 147

Conread position: 181-451
Cow position: chr17:136659-136385 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 129

Conread position: 181-451
Cow position: chr17:1882291-1882023 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 130

Conread position: 181-451
Cow position: chr17:14896983-14896710 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 145

Conread position: 181-462
Cow position: chr17:25738316-25738031 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 146

Conread position: 181-520
Cow position: chr17:6261881-6261543 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr17:14241837-14241490 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr17:15327310-15326965 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 146

Conread position: 181-520
Cow position: chr17:15852726-15852377 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr17:28026474-28026823 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 129

Conread position: 181-528
Cow position: chr17:34159761-34159402 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 129

Conread position: 182-432
Cow position: chr17:20415300-20415046 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 144

Conread position: 182-451
Cow position: chr17:15709976-15710248 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 127

Conread position: 182-451
Cow position: chr17:20232765-20232496 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 101

Conread position: 182-520
Cow position: chr17:2554244-2554591 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 144

Conread position: 182-520
Cow position: chr17:29825948-29826295 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 144

Conread position: 182-520
Cow position: chr17:34574774-34574427 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 182-528
Cow position: chr17:29302792-29302433 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 114

Conread position: 184-520
Cow position: chr17:2246061-2246402 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 7

Conread position: 186-451
Cow position: chr17:2264194-2263926 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 140

Conread position: 186-528
Cow position: chr17:43990521-43990178 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 123

Conread position: 187-421
Cow position: chr17:14031076-14031315 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 140

Conread position: 187-432
Cow position: chr17:14215013-14215262 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 141

Conread position: 187-451
Cow position: chr17:18124916-18125181 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 139

Conread position: 187-499
Cow position: chr17:16120583-16120903 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 139

Conread position: 187-507
Cow position: chr17:23721287-23720970 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 113

Conread position: 187-512
Cow position: chr17:20667523-20667192 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 78

Conread position: 187-520
Cow position: chr17:8210666-8210325 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 138

Conread position: 187-520
Cow position: chr17:11784893-11784551 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 139

Conread position: 187-520
Cow position: chr17:15437810-15437468 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 139

Conread position: 187-520
Cow position: chr17:19980113-19980455 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 139

Conread position: 187-520
Cow position: chr17:24784184-24783846 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 95

Conread position: 187-527
Cow position: chr17:36284046-36283697 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 122

Conread position: 209-520
Cow position: chr17:16153812-16153491 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 100

Show alignments to all cow chromosomes.