Cow genome map
| Conread name: | Ss1.1-rptbr0110_c10.5 |
| Conread position: | 169-451 |
| Cow position: | chr19:7490351-7490068 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 173-522 |
| Cow position: | chr19:29142321-29141967 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 174-451 |
| Cow position: | chr19:40885497-40885769 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 174-525 |
| Cow position: | chr19:33905306-33904952 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 181-451 |
| Cow position: | chr19:16129613-16129339 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 181-451 |
| Cow position: | chr19:33875657-33875383 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 181-451 |
| Cow position: | chr19:39183298-39183572 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 146 |
| Conread position: | 181-451 |
| Cow position: | chr19:40850244-40850511 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 181-520 |
| Cow position: | chr19:4302502-4302167 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 181-520 |
| Cow position: | chr19:21338603-21338950 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 181-520 |
| Cow position: | chr19:33943812-33943464 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 181-522 |
| Cow position: | chr19:5731086-5730735 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 182-451 |
| Cow position: | chr19:16318370-16318642 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 182-488 |
| Cow position: | chr19:5899266-5899575 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 183-519 |
| Cow position: | chr19:28579436-28579768 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 186-474 |
| Cow position: | chr19:32506328-32506614 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 187-451 |
| Cow position: | chr19:1587005-1587266 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 187-451 |
| Cow position: | chr19:12775358-12775089 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 187-502 |
| Cow position: | chr19:39666317-39666636 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 187-520 |
| Cow position: | chr19:15445626-15445967 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 187-520 |
| Cow position: | chr19:20106960-20106623 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-520 |
| Cow position: | chr19:22511539-22511878 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 188-520 |
| Cow position: | chr19:52149444-52149785 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 138 |
Show alignments to all cow chromosomes.