Cow genome map
| Conread name: | Ss1.1-rptbr0110_c10.5 |
| Conread position: | 173-417 |
| Cow position: | chr20:17903045-17903286 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 175-523 |
| Cow position: | chr20:30687783-30687435 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 181-420 |
| Cow position: | chr20:27875687-27875448 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 181-451 |
| Cow position: | chr20:5537135-5536865 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 181-451 |
| Cow position: | chr20:13765101-13764829 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 181-451 |
| Cow position: | chr20:15294188-15293914 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 181-451 |
| Cow position: | chr20:28720646-28720374 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 181-520 |
| Cow position: | chr20:23467461-23467810 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 129 |
| Conread position: | 181-521 |
| Cow position: | chr20:28163019-28162681 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 181-523 |
| Cow position: | chr20:15095687-15096041 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 144 |
| Conread position: | 182-451 |
| Cow position: | chr20:13794218-13793951 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 182-520 |
| Cow position: | chr20:19440119-19439774 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 182-520 |
| Cow position: | chr20:30578092-30577744 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 182-520 |
| Cow position: | chr20:33598645-33598298 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 182-531 |
| Cow position: | chr20:6906150-6906508 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 187-419 |
| Cow position: | chr20:34966871-34966635 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-451 |
| Cow position: | chr20:824978-824711 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-451 |
| Cow position: | chr20:30386029-30386296 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 187-451 |
| Cow position: | chr20:35126863-35126596 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-520 |
| Cow position: | chr20:20440756-20441093 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 187-520 |
| Cow position: | chr20:21718760-21718417 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-523 |
| Cow position: | chr20:30430467-30430123 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 46, 137 |
| Conread position: | 192-451 |
| Cow position: | chr20:28563384-28563643 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 134 |
| Conread position: | 236-520 |
| Cow position: | chr20:26053542-26053833 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 71 |
Show alignments to all cow chromosomes.