Cow genome map

Conread name: Ss1.1-rptbr0110_c10.5

Conread position: 171-451
Cow position: chr21:23653261-23652978 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 152

Conread position: 180-521
Cow position: chr21:30563983-30563632 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 130

Conread position: 181-451
Cow position: chr21:5019461-5019187 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 129

Conread position: 181-451
Cow position: chr21:26401434-26401708 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 146

Conread position: 181-451
Cow position: chr21:47647652-47647377 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 130

Conread position: 181-456
Cow position: chr21:1076352-1076076 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 93

Conread position: 181-518
Cow position: chr21:25125908-25125572 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 101

Conread position: 181-520
Cow position: chr21:148236-147890 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 133

Conread position: 181-521
Cow position: chr21:10569010-10568665 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 129

Conread position: 181-521
Cow position: chr21:40269354-40269703 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 129

Conread position: 182-450
Cow position: chr21:4036566-4036295 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 144

Conread position: 182-451
Cow position: chr21:11291002-11290730 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 127

Conread position: 182-488
Cow position: chr21:13298885-13298586 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 79

Conread position: 182-520
Cow position: chr21:2513166-2512819 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 144

Conread position: 182-528
Cow position: chr21:45783751-45783395 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 180

Conread position: 187-432
Cow position: chr21:33318079-33318328 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 141

Conread position: 187-451
Cow position: chr21:6967151-6967418 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 122

Conread position: 187-451
Cow position: chr21:28853547-28853813 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 67

Conread position: 187-451
Cow position: chr21:37373534-37373271 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 109

Conread position: 187-451
Cow position: chr21:39427375-39427110 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 138

Conread position: 187-451
Cow position: chr21:45455111-45454846 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 105

Conread position: 187-464
Cow position: chr21:7063374-7063655 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 122

Conread position: 187-520
Cow position: chr21:26634849-26635187 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 116

Conread position: 187-520
Cow position: chr21:27149247-27149589 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 122

Conread position: 187-525
Cow position: chr21:36980954-36980608 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 46, 34

Conread position: 188-507
Cow position: chr21:42916115-42915787 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 138

Conread position: 188-516
Cow position: chr21:28257726-28257394 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 125

Conread position: 191-453
Cow position: chr21:29003220-29003482 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 110

Conread position: 193-433
Cow position: chr21:36375295-36375051 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 133

Conread position: 193-457
Cow position: chr21:32831915-32832184 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 71

Conread position: 195-523
Cow position: chr21:31251303-31250957 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 170

Conread position: 198-451
Cow position: chr21:30597172-30597423 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 113

Show alignments to all cow chromosomes.