Cow genome map
| Conread name: | Ss1.1-rptbr0110_c10.5 |
| Conread position: | 173-448 |
| Cow position: | chr23:12831258-12830985 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 173-524 |
| Cow position: | chr23:2244473-2244124 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 176-451 |
| Cow position: | chr23:13513218-13512945 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 181-451 |
| Cow position: | chr23:2760044-2759770 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 146 |
| Conread position: | 181-451 |
| Cow position: | chr23:4890829-4890556 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 181-451 |
| Cow position: | chr23:37200380-37200650 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 181-511 |
| Cow position: | chr23:11780932-11780594 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 181-520 |
| Cow position: | chr23:2024938-2025286 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 129 |
| Conread position: | 182-420 |
| Cow position: | chr23:1011698-1011939 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 182-451 |
| Cow position: | chr23:5872429-5872700 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 182-451 |
| Cow position: | chr23:10874458-10874729 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 182-451 |
| Cow position: | chr23:16497113-16497385 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 144 |
| Conread position: | 187-450 |
| Cow position: | chr23:15527718-15527451 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-451 |
| Cow position: | chr23:1339666-1339931 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 187-507 |
| Cow position: | chr23:943099-942770 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 187-520 |
| Cow position: | chr23:22145169-22145511 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-520 |
| Cow position: | chr23:32350629-32350967 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 187-520 |
| Cow position: | chr23:38579800-38579466 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 188-451 |
| Cow position: | chr23:608848-608582 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 188-520 |
| Cow position: | chr23:36029253-36029589 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 198-528 |
| Cow position: | chr23:3418335-3417996 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 128 |
Show alignments to all cow chromosomes.