Cow genome map

Conread name: Ss1.1-rptbr0110_c10.5

Conread position: 136-451
Cow position: chr24:19184440-19184124 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 187

Conread position: 141-420
Cow position: chr24:36299668-36299395 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 199, 35

Conread position: 175-521
Cow position: chr24:6678277-6677925 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 153

Conread position: 176-524
Cow position: chr24:42583533-42583883 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 5

Conread position: 180-526
Cow position: chr24:40100697-40101038 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 11

Conread position: 181-420
Cow position: chr24:12333495-12333739 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 129

Conread position: 181-420
Cow position: chr24:40468178-40468421 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 129

Conread position: 181-451
Cow position: chr24:6411707-6411433 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr24:146378-146725 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 11

Conread position: 181-520
Cow position: chr24:16560077-16560425 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 129

Conread position: 181-520
Cow position: chr24:19835634-19835288 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 148

Conread position: 182-451
Cow position: chr24:13190396-13190124 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 40

Conread position: 182-451
Cow position: chr24:19703729-19703457 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 144

Conread position: 182-451
Cow position: chr24:36557340-36557610 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 142

Conread position: 182-458
Cow position: chr24:36037987-36038263 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 114, 137

Conread position: 182-513
Cow position: chr24:17454906-17455247 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 182-520
Cow position: chr24:6962519-6962866 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 127

Conread position: 184-526
Cow position: chr24:37214784-37215134 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 139

Conread position: 187-449
Cow position: chr24:9073101-9073361 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 109

Conread position: 187-451
Cow position: chr24:208781-209047 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 139

Conread position: 187-451
Cow position: chr24:11150903-11151169 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 138

Conread position: 187-520
Cow position: chr24:14377460-14377796 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 217
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 139

Conread position: 187-521
Cow position: chr24:7063764-7063423 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 139

Conread position: 187-521
Cow position: chr24:17322902-17322558 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 139

Conread position: 187-522
Cow position: chr24:6021855-6022202 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 122

Conread position: 187-523
Cow position: chr24:9089839-9090182 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 108

Conread position: 191-462
Cow position: chr24:38639767-38639492 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 163

Conread position: 198-451
Cow position: chr24:6327155-6327410 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 16

Conread position: 236-520
Cow position: chr24:16182770-16182479 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 71

Show alignments to all cow chromosomes.