Cow genome map
| Conread name: | Ss1.1-rptbr0110_c10.5 |
| Conread position: | 173-447 |
| Cow position: | chr27:10281749-10281474 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 153 |
| Conread position: | 175-528 |
| Cow position: | chr27:27150633-27150290 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 181-451 |
| Cow position: | chr27:4332894-4333166 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 146 |
| Conread position: | 181-451 |
| Cow position: | chr27:15034961-15035235 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 181-520 |
| Cow position: | chr27:4981517-4981169 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 181-520 |
| Cow position: | chr27:27288642-27288295 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 146 |
| Conread position: | 181-528 |
| Cow position: | chr27:12749185-12748829 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 182-420 |
| Cow position: | chr27:21453563-21453321 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 182-432 |
| Cow position: | chr27:66672-66926 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 182-515 |
| Cow position: | chr27:27665139-27664796 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 183-451 |
| Cow position: | chr27:161125-160855 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 187-451 |
| Cow position: | chr27:1676434-1676700 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 187-451 |
| Cow position: | chr27:9331881-9331616 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 187-520 |
| Cow position: | chr27:797426-797767 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 187-520 |
| Cow position: | chr27:16032263-16032604 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 188-520 |
| Cow position: | chr27:22743254-22743595 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 192-520 |
| Cow position: | chr27:26327187-26326861 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 212-462 |
| Cow position: | chr27:30448419-30448678 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 7, 114 |
Show alignments to all cow chromosomes.