Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               175-420
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               176-525
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 152
               

               Conread position:
               180-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               181-420
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-527
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 145
               

               Conread position:
               182-519
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 173
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               184-416
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 174
               

               Conread position:
               187-417
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-507
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 181
               

               Conread position:
               187-513
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-522
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               191-453
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               191-520
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               192-433
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               192-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 136
               

               Conread position:
               196-453
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 27
               
Show alignments to all cow chromosomes.