Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               22-417
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 21
               

               Conread position:
               166-507
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               173-341
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 118
               

               Conread position:
               173-520
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 134
               

               Conread position:
               175-524
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 151
               

               Conread position:
               176-499
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               180-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               180-520
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               181-500
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-524
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               182-507
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               183-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               185-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 141
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 111
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               186-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               186-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               186-528
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 140
               

               Conread position:
               187-420
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-420
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               187-447
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-449
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 109
               

               Conread position:
               187-450
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-458
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               187-504
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 125
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-524
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               188-398
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               188-447
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               188-451
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               189-453
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               192-462
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               192-492
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               195-519
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 34
               

               Conread position:
               198-520
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               209-483
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               216-519
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 111
               
Show alignments to all cow chromosomes.