Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               164-525
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               16, 159
               

               Conread position:
               169-420
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 141
               

               Conread position:
               171-528
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               175-421
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               176-417
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 49
               

               Conread position:
               176-451
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               176-507
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 153
               

               Conread position:
               180-452
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               180-462
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               180-519
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 172
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-523
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-523
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 174
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               187-450
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-507
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 109
               

               Conread position:
               187-519
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 140
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-525
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               187-529
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 76
               

               Conread position:
               187-533
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               188-528
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               192-451
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 134
               

               Conread position:
               198-451
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               199-453
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               204-521
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               219-520
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               236-507
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 71
               
Show alignments to all cow chromosomes.