Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               169-457
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               174-450
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 153
               

               Conread position:
               175-453
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               176-453
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               176-509
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               176-516
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               180-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               180-522
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               181-440
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               181-447
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 147
               

               Conread position:
               181-450
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-450
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 122
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               181-453
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-507
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 135
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               181-522
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               182-419
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-431
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               182-432
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-449
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               208, 52
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-528
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               186-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               186-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               187-427
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               187-431
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               187-440
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               187-488
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 42
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 123
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-524
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               188-528
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               191-528
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               192-451
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               195-451
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 131
               

               Conread position:
               208-520
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               208-520
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 118
               
Show alignments to all cow chromosomes.