Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               169-520
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               173-528
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               227, 27
               

               Conread position:
               175-451
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               176-451
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 148
               

               Conread position:
               176-458
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 150
               

               Conread position:
               181-447
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               181-450
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               181-515
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               181-525
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-528
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 121
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-462
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 103
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               186-529
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               187-420
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-482
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               187-502
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 166
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               187-524
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               188-453
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               195-453
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 131
               

               Conread position:
               198-529
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 128
               
Show alignments to all cow chromosomes.