Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               169-451
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 140
               

               Conread position:
               171-527
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 93
               

               Conread position:
               173-432
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 152
               

               Conread position:
               173-449
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               60, 101
               

               Conread position:
               175-451
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               176-451
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               176-507
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 152
               

               Conread position:
               179-421
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 117
               

               Conread position:
               180-520
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 101
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-461
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 82
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 138
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-527
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               181-528
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 148
               

               Conread position:
               182-413
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-432
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-447
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 130
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               182-464
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               182-514
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               182-527
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               184-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 125
               

               Conread position:
               185-453
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               186-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 118
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 119
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-453
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               187-458
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               187-488
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-493
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 137
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               188-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               191-520
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               192-519
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               192-520
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 136
               
Show alignments to all cow chromosomes.