Cow genome map


           Conread name:
           Ss1.1-rptbr0110_c10.5
        

               Conread position:
               167-526
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               169-450
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               169-520
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               173-417
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               173-420
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               173-423
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 154
               

               Conread position:
               173-453
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               173-457
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 145
               

               Conread position:
               173-519
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 108
               

               Conread position:
               175-451
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               175-520
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               175-520
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               175-520
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 135
               

               Conread position:
               176-450
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 106
               

               Conread position:
               176-451
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               176-519
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               180-504
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 117
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               181-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               181-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               181-525
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               181-527
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 147
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-451
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               182-453
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               182-484
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               182-507
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               182-513
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               182-514
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               182-520
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               182-529
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               183-521
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               185-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 124
               

               Conread position:
               186-449
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               186-507
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               187-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               187-447
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               187-453
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               187-453
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-453
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 167
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 126
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 95
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 138
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               187-529
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               188-440
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               188-449
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               188-450
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               188-520
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               192-528
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               194-493
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               195-451
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               195-520
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               198-520
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               202-461
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               208-451
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 118
               

               Conread position:
               208-520
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               209-520
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               216-458
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 110
               
Show alignments to all cow chromosomes.