Cow genome map


           Conread name:
           Ss1.1-rptbr0137_h19.5
        

               Conread position:
               1-137
               

               Cow position:
               chr23:30270907-30270771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               124
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr23:30268759-30268585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-436
               

               Cow position:
               chr23:30267000-30266877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-523
               

               Cow position:
               chr23:30266782-30266695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               517-660
               

               Cow position:
               chr23:30261868-30261725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               139
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               661-2064
               

               Cow position:
               chr23:30257688-30256276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1448
               

               Alignm identity:
               1207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 115
               
Show alignments to all cow chromosomes.