Cow genome map

Conread name: Ss1.1-rpty638b_l2.5

Conread position: 2-436
Cow position: chr13:56292207-56291772 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 3-755
Cow position: chr13:56292536-56291791 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 7

Conread position: 13-627
Cow position: chr13:39930566-39931176 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 19

Conread position: 14-767
Cow position: chr13:39983901-39984654 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 43

Conread position: 15-596
Cow position: chr13:39984322-39984903 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-676
Cow position: chr13:39984238-39984899 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 439

Conread position: 15-754
Cow position: chr13:22124847-22125586 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 217

Conread position: 15-754
Cow position: chr13:22125183-22125922 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 433
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 122, 130

Conread position: 15-754
Cow position: chr13:24162909-24163648 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 436
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 122, 130

Conread position: 15-766
Cow position: chr13:24162573-24163324 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 129

Conread position: 15-767
Cow position: chr13:39984070-39984822 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 458

Conread position: 15-767
Cow position: chr13:56292695-56291948 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 180

Conread position: 23-766
Cow position: chr13:39983994-39984737 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 24-753
Cow position: chr13:24162834-24163563 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 130

Conread position: 26-767
Cow position: chr13:56292847-56292116 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 455
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 303, 72

Conread position: 32-588
Cow position: chr13:56292336-56291790 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 135

Conread position: 36-724
Cow position: chr13:39984175-39984863 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 36-754
Cow position: chr13:22124784-22125502 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 36-754
Cow position: chr13:24162510-24163228 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 55-767
Cow position: chr13:56292738-56292032 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 21

Conread position: 75-693
Cow position: chr13:56333694-56334321 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 478

Conread position: 75-721
Cow position: chr13:56333526-56334180 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 391
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 140, 154

Conread position: 76-766
Cow position: chr13:56292549-56291865 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 34

Conread position: 120-711
Cow position: chr13:39930587-39931176 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 105

Conread position: 149-687
Cow position: chr13:56333516-56334054 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 319
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 420, 411

Conread position: 155-730
Cow position: chr13:29183763-29183201 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 345
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 200, 70

Conread position: 161-754
Cow position: chr13:56292879-56292286 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 366
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 33

Conread position: 177-724
Cow position: chr13:56333712-56334268 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 339
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 204, 215

Conread position: 221-768
Cow position: chr13:22124717-22125262 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 338
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 89

Conread position: 223-721
Cow position: chr13:56333506-56334004 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 299
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 176, 189

Conread position: 242-768
Cow position: chr13:24162464-24162988 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 330
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 63, 68

Conread position: 243-766
Cow position: chr13:24162549-24163072 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 321
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 241, 278

Conread position: 246-767
Cow position: chr13:39930629-39931150 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 139

Conread position: 279-754
Cow position: chr13:24162417-24162892 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 367

Conread position: 279-763
Cow position: chr13:22124691-22125175 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 377, 367

Conread position: 285-766
Cow position: chr13:39930584-39931065 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 109

Conread position: 401-728
Cow position: chr13:56333516-56333843 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 177

Show alignments to all cow chromosomes.