Cow genome map

Conread name: Ss1.1-rpty638b_l2.5

Conread position: 2-629
Cow position:
Alignm length: 631
Alignm identity: 372
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 145, 152

Conread position: 2-765
Cow position:
Alignm length: 769
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 113

Conread position: 9-767
Cow position:
Alignm length: 765
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 277

Conread position: 10-640
Cow position:
Alignm length: 633
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 5

Conread position: 10-766
Cow position:
Alignm length: 758
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 730, 737

Conread position: 12-715
Cow position:
Alignm length: 708
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 475

Conread position: 12-766
Cow position:
Alignm length: 761
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 223

Conread position: 12-766
Cow position:
Alignm length: 761
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 13-767
Cow position:
Alignm length: 757
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 480

Conread position: 15-355
Cow position:
Alignm length: 344
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 136

Conread position: 15-386
Cow position:
Alignm length: 373
Alignm identity: 236
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 136

Conread position: 15-530
Cow position:
Alignm length: 519
Alignm identity: 312
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 340, 0

Conread position: 15-601
Cow position:
Alignm length: 594
Alignm identity: 349
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 47

Conread position: 15-611
Cow position:
Alignm length: 603
Alignm identity: 362
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 47

Conread position: 15-644
Cow position:
Alignm length: 632
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 139

Conread position: 15-667
Cow position:
Alignm length: 657
Alignm identity: 384
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 137, 124

Conread position: 15-694
Cow position:
Alignm length: 686
Alignm identity: 398
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 57

Conread position: 15-721
Cow position:
Alignm length: 713
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 46

Conread position: 15-722
Cow position:
Alignm length: 711
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 209

Conread position: 15-724
Cow position:
Alignm length: 715
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 58

Conread position: 15-724
Cow position:
Alignm length: 716
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 42

Conread position: 15-762
Cow position:
Alignm length: 750
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 136

Conread position: 15-766
Cow position:
Alignm length: 754
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 139

Conread position: 15-766
Cow position:
Alignm length: 759
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 120

Conread position: 15-766
Cow position:
Alignm length: 756
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 15-766
Cow position:
Alignm length: 757
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 15-766
Cow position:
Alignm length: 756
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 15-766
Cow position:
Alignm length: 760
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 204

Conread position: 15-766
Cow position:
Alignm length: 758
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 15-766
Cow position:
Alignm length: 756
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 120

Conread position: 15-766
Cow position:
Alignm length: 756
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 43

Conread position: 15-766
Cow position:
Alignm length: 759
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 41

Conread position: 15-767
Cow position:
Alignm length: 757
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 90

Conread position: 15-767
Cow position:
Alignm length: 756
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 136

Conread position: 15-767
Cow position:
Alignm length: 758
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 41

Conread position: 16-389
Cow position:
Alignm length: 377
Alignm identity: 245
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 7, 61

Conread position: 19-724
Cow position:
Alignm length: 710
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 19-732
Cow position:
Alignm length: 717
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 123

Conread position: 21-766
Cow position:
Alignm length: 750
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 62

Conread position: 22-723
Cow position:
Alignm length: 703
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 550

Conread position: 22-767
Cow position:
Alignm length: 752
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 135

Conread position: 25-766
Cow position:
Alignm length: 748
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 25-766
Cow position:
Alignm length: 747
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 26-766
Cow position:
Alignm length: 742
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 119

Conread position: 27-676
Cow position:
Alignm length: 656
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 115

Conread position: 27-726
Cow position:
Alignm length: 703
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 27-728
Cow position:
Alignm length: 704
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 118

Conread position: 27-761
Cow position:
Alignm length: 738
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 371

Conread position: 27-765
Cow position:
Alignm length: 740
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 721, 717

Conread position: 27-766
Cow position:
Alignm length: 742
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 543, 536

Conread position: 27-767
Cow position:
Alignm length: 746
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 31

Conread position: 27-767
Cow position:
Alignm length: 745
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 112

Conread position: 32-729
Cow position:
Alignm length: 701
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 83

Conread position: 32-767
Cow position:
Alignm length: 738
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 451

Conread position: 33-348
Cow position:
Alignm length: 320
Alignm identity: 203
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 103, 112

Conread position: 33-349
Cow position:
Alignm length: 319
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 23

Conread position: 33-446
Cow position:
Alignm length: 418
Alignm identity: 258
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 24

Conread position: 33-448
Cow position:
Alignm length: 420
Alignm identity: 252
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 188, 176

Conread position: 33-518
Cow position:
Alignm length: 487
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 33-724
Cow position:
Alignm length: 696
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 33-728
Cow position:
Alignm length: 698
Alignm identity: 400
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 127

Conread position: 33-766
Cow position:
Alignm length: 738
Alignm identity: 428
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 195, 202

Conread position: 33-766
Cow position:
Alignm length: 740
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 111

Conread position: 33-766
Cow position:
Alignm length: 740
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 33-766
Cow position:
Alignm length: 739
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 33-767
Cow position:
Alignm length: 738
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 33-767
Cow position:
Alignm length: 737
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 361

Conread position: 33-767
Cow position:
Alignm length: 743
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 124

Conread position: 33-767
Cow position:
Alignm length: 738
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 35-601
Cow position:
Alignm length: 567
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-767
Cow position:
Alignm length: 735
Alignm identity: 427
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 294, 279

Conread position: 36-375
Cow position:
Alignm length: 342
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 21

Conread position: 36-560
Cow position:
Alignm length: 528
Alignm identity: 306
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 100

Conread position: 36-766
Cow position:
Alignm length: 736
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 36-767
Cow position:
Alignm length: 735
Alignm identity: 429
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 100, 123

Conread position: 36-767
Cow position:
Alignm length: 735
Alignm identity: 426
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 331, 336

Conread position: 37-732
Cow position:
Alignm length: 700
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 45

Conread position: 42-767
Cow position:
Alignm length: 737
Alignm identity: 428
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 15

Conread position: 47-459
Cow position:
Alignm length: 415
Alignm identity: 254
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 110

Conread position: 58-680
Cow position:
Alignm length: 624
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 66-766
Cow position:
Alignm length: 706
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 61

Conread position: 74-729
Cow position:
Alignm length: 657
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 486

Conread position: 75-724
Cow position:
Alignm length: 653
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 75-760
Cow position:
Alignm length: 693
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 77

Conread position: 75-766
Cow position:
Alignm length: 698
Alignm identity: 415
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 180

Conread position: 75-767
Cow position:
Alignm length: 694
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 233

Conread position: 83-640
Cow position:
Alignm length: 559
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 50

Conread position: 85-767
Cow position:
Alignm length: 687
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 136

Conread position: 85-767
Cow position:
Alignm length: 687
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 89-766
Cow position:
Alignm length: 686
Alignm identity: 411
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 27

Conread position: 93-727
Cow position:
Alignm length: 641
Alignm identity: 370
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 22

Conread position: 93-767
Cow position:
Alignm length: 678
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 569, 427

Conread position: 110-766
Cow position:
Alignm length: 662
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 100

Conread position: 120-767
Cow position:
Alignm length: 651
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 139-764
Cow position:
Alignm length: 629
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 257

Conread position: 158-604
Cow position:
Alignm length: 450
Alignm identity: 278
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 193, 219

Conread position: 159-740
Cow position:
Alignm length: 585
Alignm identity: 354
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 208, 77

Conread position: 210-766
Cow position:
Alignm length: 561
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 179

Conread position: 230-520
Cow position:
Alignm length: 292
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 7

Conread position: 234-766
Cow position:
Alignm length: 536
Alignm identity: 326
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 168, 153

Conread position: 239-767
Cow position:
Alignm length: 534
Alignm identity: 335
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 10

Conread position: 242-766
Cow position:
Alignm length: 529
Alignm identity: 322
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 67

Conread position: 243-766
Cow position:
Alignm length: 526
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 247

Conread position: 243-766
Cow position:
Alignm length: 525
Alignm identity: 315
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 121, 114

Conread position: 243-767
Cow position:
Alignm length: 529
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 75

Conread position: 253-766
Cow position:
Alignm length: 515
Alignm identity: 304
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 318, 309

Conread position: 255-723
Cow position:
Alignm length: 472
Alignm identity: 298
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 314, 302

Conread position: 255-761
Cow position:
Alignm length: 509
Alignm identity: 308
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 240, 228

Conread position: 257-766
Cow position:
Alignm length: 511
Alignm identity: 304
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 112, 98

Conread position: 261-725
Cow position:
Alignm length: 465
Alignm identity: 279
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 324-766
Cow position:
Alignm length: 446
Alignm identity: 286
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 80

Conread position: 334-766
Cow position:
Alignm length: 439
Alignm identity: 272
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 69, 56

Conread position: 408-766
Cow position:
Alignm length: 359
Alignm identity: 212
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 410-767
Cow position:
Alignm length: 358
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 579-767
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.