Cow genome map
Conread name: | Ss1.1-rpty638b_l2.5 |
Conread position: | 1-767 |
Cow position: | chr17:22590279-22589513 (view UCSC Genome Browser custom track) |
Alignm length: | 771 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 23 |
Conread position: | 1-768 |
Cow position: | chr17:22552273-22551506 (view UCSC Genome Browser custom track) |
Alignm length: | 772 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 22 |
Conread position: | 2-609 |
Cow position: | chr17:22473326-22473934 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 410, 375 |
Conread position: | 6-766 |
Cow position: | chr17:22553022-22552264 (view UCSC Genome Browser custom track) |
Alignm length: | 762 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 12 |
Conread position: | 10-717 |
Cow position: | chr17:22452380-22451674 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 12 |
Conread position: | 10-766 |
Cow position: | chr17:22499395-22498639 (view UCSC Genome Browser custom track) |
Alignm length: | 763 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 56 |
Conread position: | 12-524 |
Cow position: | chr17:22589680-22589170 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 150 |
Conread position: | 12-699 |
Cow position: | chr17:22499225-22498538 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-449 |
Cow position: | chr17:22452040-22451606 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 268 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 37, 43 |
Conread position: | 15-685 |
Cow position: | chr17:22589845-22589175 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 229 |
Conread position: | 15-710 |
Cow position: | chr17:22552175-22551480 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 42 |
Conread position: | 15-727 |
Cow position: | chr17:41441034-41440322 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 413 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 145, 121 |
Conread position: | 15-750 |
Cow position: | chr17:22589929-22589194 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 562, 542 |
Conread position: | 15-764 |
Cow position: | chr17:22499306-22498557 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 570, 551 |
Conread position: | 15-767 |
Cow position: | chr17:22552343-22551591 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 555, 548 |
Conread position: | 15-767 |
Cow position: | chr17:22552427-22551675 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 139 |
Conread position: | 15-767 |
Cow position: | chr17:22552511-22551759 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 136 |
Conread position: | 15-767 |
Cow position: | chr17:22552595-22551843 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 536 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 123 |
Conread position: | 15-767 |
Cow position: | chr17:22552679-22551927 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 130 |
Conread position: | 15-767 |
Cow position: | chr17:22552763-22552011 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 43 |
Conread position: | 15-767 |
Cow position: | chr17:22552847-22552095 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-767 |
Cow position: | chr17:22552931-22552179 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 733, 728 |
Conread position: | 15-767 |
Cow position: | chr17:22590013-22589261 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 640, 613 |
Conread position: | 16-767 |
Cow position: | chr17:22553099-22552347 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 211 |
Conread position: | 17-761 |
Cow position: | chr17:22590179-22589435 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 636, 613 |
Conread position: | 21-693 |
Cow position: | chr17:22473261-22473934 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 663, 0 |
Conread position: | 27-731 |
Cow position: | chr17:22590085-22589382 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 124 |
Conread position: | 32-767 |
Cow position: | chr17:22553166-22552431 (view UCSC Genome Browser custom track) |
Alignm length: | 737 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 449, 442 |
Conread position: | 33-604 |
Cow position: | chr17:44467715-44468286 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 318 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 33-638 |
Cow position: | chr17:41440848-41440243 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 349 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 104, 112 |
Conread position: | 65-767 |
Cow position: | chr17:22452410-22451708 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 338 |
Conread position: | 75-767 |
Cow position: | chr17:22590289-22589597 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 494, 484 |
Conread position: | 96-767 |
Cow position: | chr17:22499393-22498722 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 58 |
Conread position: | 105-768 |
Cow position: | chr17:22473261-22473924 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 214 |
Conread position: | 159-768 |
Cow position: | chr17:22590289-22589680 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 416 |
Conread position: | 177-766 |
Cow position: | chr17:41441040-41440451 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 343 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 156, 134 |
Conread position: | 180-724 |
Cow position: | chr17:22473174-22473712 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 28 |
Conread position: | 200-768 |
Cow position: | chr17:22553166-22552598 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 455, 445 |
Conread position: | 321-767 |
Cow position: | chr17:22590295-22589849 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 235 |
Conread position: | 432-768 |
Cow position: | chr17:22499393-22499057 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 224 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 315, 311 |
Conread position: | 445-767 |
Cow position: | chr17:22553173-22552851 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 213 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 208, 203 |
Conread position: | 478-722 |
Cow position: | chr17:22590306-22590062 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 165 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 77, 93 |
Conread position: | 483-760 |
Cow position: | chr17:22452412-22452135 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 185 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 595-768 |
Cow position: | chr17:22499398-22499225 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 122 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.