Cow genome map
| Conread name: | Ss1.1-rpty638b_l2.5 |
| Conread position: | 7-379 |
| Cow position: | chr2:48689545-48689172 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 11-760 |
| Cow position: | chr2:78755585-78756332 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 12-555 |
| Cow position: | chr2:86465687-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 246, 254 |
| Conread position: | 13-724 |
| Cow position: | chr2:78754098-78754801 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 15-563 |
| Cow position: | chr2:5874674-5874126 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 15-716 |
| Cow position: | chr2:78755672-78756371 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 15-723 |
| Cow position: | chr2:86465522-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 421 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 143, 120 |
| Conread position: | 15-763 |
| Cow position: | chr2:78755507-78756253 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 11 |
| Conread position: | 15-765 |
| Cow position: | chr2:82799698-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 15-766 |
| Cow position: | chr2:5875178-5874427 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 303 |
| Conread position: | 15-767 |
| Cow position: | chr2:5875010-5874258 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 106 |
| Conread position: | 15-767 |
| Cow position: | chr2:78754684-78755419 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 15-767 |
| Cow position: | chr2:78754836-78755586 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 541, 501 |
| Conread position: | 15-768 |
| Cow position: | chr2:78755172-78755921 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 136 |
| Conread position: | 20-767 |
| Cow position: | chr2:82799451-82800198 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 21-724 |
| Cow position: | chr2:86465108-86465811 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 428 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 22-767 |
| Cow position: | chr2:82799621-82800366 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 23-730 |
| Cow position: | chr2:5874834-5874127 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 212 |
| Conread position: | 27-712 |
| Cow position: | chr2:5875082-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 118 |
| Conread position: | 32-767 |
| Cow position: | chr2:78754533-78755252 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 512, 157 |
| Conread position: | 32-767 |
| Cow position: | chr2:82799547-82800282 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 37-766 |
| Cow position: | chr2:82799379-82800113 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 187 |
| Conread position: | 75-766 |
| Cow position: | chr2:78754812-78755502 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 232 |
| Conread position: | 75-767 |
| Cow position: | chr2:78754410-78755084 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 97-766 |
| Cow position: | chr2:5875180-5874511 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 191-762 |
| Cow position: | chr2:78754109-78754675 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-729 |
| Cow position: | chr2:48689552-48689076 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 267-767 |
| Cow position: | chr2:78754101-78754596 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 432-766 |
| Cow position: | chr2:48689540-48689207 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 477-767 |
| Cow position: | chr2:82799402-82799694 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 245 |
Show alignments to all cow chromosomes.