Cow genome map
| Conread name: | Ss1.1-rpty638b_l2.5 |
| Conread position: | 10-521 |
| Cow position: | chr21:34223053-34222542 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 15-357 |
| Cow position: | chr21:34222880-34222538 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 198, 208 |
| Conread position: | 26-766 |
| Cow position: | chr21:12658931-12659671 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 199 |
| Conread position: | 27-753 |
| Cow position: | chr21:12608662-12607936 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 445 |
| Conread position: | 27-761 |
| Cow position: | chr21:12608830-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 424 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 118, 112 |
| Conread position: | 27-761 |
| Cow position: | chr21:12659268-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 434 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 27-766 |
| Cow position: | chr21:12659100-12659838 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 199 |
| Conread position: | 27-766 |
| Cow position: | chr21:12659184-12659923 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 118 |
| Conread position: | 33-767 |
| Cow position: | chr21:12608908-12608174 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 432 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 103 |
| Conread position: | 42-555 |
| Cow position: | chr21:34223101-34222592 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 215, 15 |
| Conread position: | 48-695 |
| Cow position: | chr21:12659373-12660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 379 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 166, 177 |
| Conread position: | 74-690 |
| Cow position: | chr21:34223154-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 119-766 |
| Cow position: | chr21:12608906-12608259 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 393 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 120-726 |
| Cow position: | chr21:12658857-12659463 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 172-722 |
| Cow position: | chr21:12608934-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 242-767 |
| Cow position: | chr21:34223154-34222632 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 243-724 |
| Cow position: | chr21:34223072-34222591 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 145 |
| Conread position: | 252-766 |
| Cow position: | chr21:12658905-12659419 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-766 |
| Cow position: | chr21:12658830-12659335 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 276-767 |
| Cow position: | chr21:12608917-12608426 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 142, 119 |
| Conread position: | 401-766 |
| Cow position: | chr21:12658802-12659167 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-766 |
| Cow position: | chr21:12658800-12659083 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.