Cow genome map
Conread name: | Ss1.1-rpty638b_l2.5 |
Conread position: | 2-203 |
Cow position: | chr23:24626551-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 137 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 69, 74 |
Conread position: | 7-689 |
Cow position: | chr23:24547333-24546653 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 12-386 |
Cow position: | chr23:24535792-24535417 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 232 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 46 |
Conread position: | 13-689 |
Cow position: | chr23:25626368-25627041 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 44 |
Conread position: | 15-307 |
Cow position: | chr23:24522480-24522187 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 192 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 290, 0 |
Conread position: | 15-349 |
Cow position: | chr23:24654121-24654455 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 210 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 136, 124 |
Conread position: | 15-386 |
Cow position: | chr23:24522564-24522193 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 243 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 136, 129 |
Conread position: | 15-438 |
Cow position: | chr23:25660323-25660746 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 267 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 37, 50 |
Conread position: | 15-470 |
Cow position: | chr23:25660239-25660694 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 147 |
Conread position: | 15-560 |
Cow position: | chr23:24535957-24535411 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 339 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 78, 92 |
Conread position: | 15-592 |
Cow position: | chr23:25698652-25698075 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 36 |
Conread position: | 15-611 |
Cow position: | chr23:25724039-25723445 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 366 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 52, 41 |
Conread position: | 15-693 |
Cow position: | chr23:24639388-24640066 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 116 |
Conread position: | 15-754 |
Cow position: | chr23:24560802-24560063 (view UCSC Genome Browser custom track) |
Alignm length: | 744 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 639, 631 |
Conread position: | 15-767 |
Cow position: | chr23:25626034-25626783 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 46 |
Conread position: | 17-341 |
Cow position: | chr23:24521972-24521653 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 209 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 35, 40 |
Conread position: | 17-352 |
Cow position: | chr23:24626398-24626733 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 217 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-767 |
Cow position: | chr23:24560880-24560134 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 36 |
Conread position: | 26-761 |
Cow position: | chr23:25698794-25698074 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 449 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 78, 53 |
Conread position: | 26-766 |
Cow position: | chr23:25626129-25626866 (view UCSC Genome Browser custom track) |
Alignm length: | 747 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 40 |
Conread position: | 27-448 |
Cow position: | chr23:24639652-24640073 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 272 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 27-606 |
Cow position: | chr23:25660167-25660746 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 29 |
Conread position: | 27-689 |
Cow position: | chr23:25724111-25723453 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 397 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 133, 127 |
Conread position: | 27-753 |
Cow position: | chr23:25626298-25627021 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 138 |
Conread position: | 27-760 |
Cow position: | chr23:25626214-25626944 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 49 |
Conread position: | 27-765 |
Cow position: | chr23:24639316-24640054 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 73 |
Conread position: | 32-767 |
Cow position: | chr23:24639237-24639972 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 26 |
Conread position: | 33-523 |
Cow position: | chr23:25626556-25627043 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 33-605 |
Cow position: | chr23:24560700-24560128 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 25 |
Conread position: | 33-644 |
Cow position: | chr23:24536023-24535411 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 151 |
Conread position: | 35-539 |
Cow position: | chr23:24626251-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 37-639 |
Cow position: | chr23:24522791-24522192 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 25 |
Conread position: | 75-766 |
Cow position: | chr23:24560910-24560219 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 65 |
Conread position: | 85-727 |
Cow position: | chr23:24522825-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 12 |
Conread position: | 89-690 |
Cow position: | chr23:25660145-25660746 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 50 |
Conread position: | 89-728 |
Cow position: | chr23:24536051-24535411 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 221 |
Conread position: | 89-767 |
Cow position: | chr23:24639212-24639888 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 25 |
Conread position: | 91-722 |
Cow position: | chr23:24547334-24546703 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 49 |
Conread position: | 111-508 |
Cow position: | chr23:25724111-25723714 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 261 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 41, 15 |
Conread position: | 119-623 |
Cow position: | chr23:24626251-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 120-464 |
Cow position: | chr23:24654058-24654402 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 223 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 155-767 |
Cow position: | chr23:25626006-25626615 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 415, 405 |
Conread position: | 176-767 |
Cow position: | chr23:24547333-24546742 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 393, 386 |
Conread position: | 177-765 |
Cow position: | chr23:25660149-25660737 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 48 |
Conread position: | 179-767 |
Cow position: | chr23:24560890-24560302 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 46 |
Conread position: | 181-672 |
Cow position: | chr23:24654034-24654520 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 310 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 5, 203 |
Conread position: | 195-592 |
Cow position: | chr23:25724111-25723714 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 258 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 118, 113 |
Conread position: | 201-754 |
Cow position: | chr23:24536023-24535470 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 368, 361 |
Conread position: | 205-766 |
Cow position: | chr23:24522791-24522233 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 108 |
Conread position: | 243-762 |
Cow position: | chr23:25698676-25698157 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 320 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 65, 60 |
Conread position: | 247-667 |
Cow position: | chr23:25724143-25723723 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 267 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 61, 50 |
Conread position: | 257-707 |
Cow position: | chr23:24626302-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 130 |
Conread position: | 259-767 |
Cow position: | chr23:24547334-24546826 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 50 |
Conread position: | 279-766 |
Cow position: | chr23:24536029-24535542 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 282 |
Conread position: | 283-767 |
Cow position: | chr23:25660171-25660655 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 191 |
Conread position: | 285-762 |
Cow position: | chr23:25698787-25698325 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 302 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 66, 46 |
Conread position: | 304-762 |
Cow position: | chr23:24626265-24626723 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 32 |
Conread position: | 327-767 |
Cow position: | chr23:25698676-25698236 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 269 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 84, 60 |
Conread position: | 337-767 |
Cow position: | chr23:24522825-24522400 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 265 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 341-766 |
Cow position: | chr23:25660145-25660570 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 278 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 41, 53 |
Conread position: | 341-767 |
Cow position: | chr23:24536051-24535625 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 304 |
Conread position: | 353-636 |
Cow position: | chr23:24521972-24521689 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 182 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 201, 210 |
Conread position: | 385-767 |
Cow position: | chr23:24626261-24626644 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 254 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 5, 33 |
Conread position: | 394-761 |
Cow position: | chr23:25724081-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 240 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 10, 81 |
Conread position: | 412-763 |
Cow position: | chr23:24639197-24639548 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 225 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 9, 29 |
Conread position: | 415-766 |
Cow position: | chr23:25724143-25723792 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 231 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 62, 47 |
Conread position: | 426-767 |
Cow position: | chr23:25660146-25660487 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 237 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 40, 52 |
Conread position: | 441-768 |
Cow position: | chr23:24654043-24654370 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 210 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 128, 120 |
Conread position: | 476-767 |
Cow position: | chr23:25625991-25626282 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 188 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 259, 270 |
Conread position: | 511-762 |
Cow position: | chr23:24521982-24521730 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 160 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 537-768 |
Cow position: | chr23:24536023-24535792 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 152 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 34, 26 |
Show alignments to all cow chromosomes.