Cow genome map
| Conread name: | Ss1.1-rpty638b_l2.5 |
| Conread position: | 1-632 |
| Cow position: | chr8:45201343-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 1-766 |
| Cow position: | chr8:45200923-45201688 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-767 |
| Cow position: | chr8:45201008-45201773 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-765 |
| Cow position: | chr8:46816627-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 17 |
| Conread position: | 7-711 |
| Cow position: | chr8:48406962-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 10-639 |
| Cow position: | chr8:55581073-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 12 |
| Conread position: | 11-767 |
| Cow position: | chr8:46815960-46816716 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 369 |
| Conread position: | 15-350 |
| Cow position: | chr8:46817056-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 15-437 |
| Cow position: | chr8:55581329-55581751 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-460 |
| Cow position: | chr8:48406703-48406258 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 367, 381 |
| Conread position: | 15-690 |
| Cow position: | chr8:45201525-45202191 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 15-760 |
| Cow position: | chr8:48407039-48406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 15-763 |
| Cow position: | chr8:48407543-48406795 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 15-766 |
| Cow position: | chr8:45201189-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 556, 549 |
| Conread position: | 15-766 |
| Cow position: | chr8:46816132-46816883 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 120 |
| Conread position: | 15-766 |
| Cow position: | chr8:48407291-48406540 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 15-766 |
| Cow position: | chr8:48407627-48406876 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 546 |
| Conread position: | 15-767 |
| Cow position: | chr8:45201105-45201857 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 43 |
| Conread position: | 15-767 |
| Cow position: | chr8:46816216-46816968 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 378 |
| Conread position: | 15-767 |
| Cow position: | chr8:46816468-46817220 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 15-768 |
| Cow position: | chr8:55580909-55581662 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 17-434 |
| Cow position: | chr8:46816974-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 36 |
| Conread position: | 17-764 |
| Cow position: | chr8:46816554-46817301 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 636, 629 |
| Conread position: | 17-767 |
| Cow position: | chr8:46816386-46817136 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 391 |
| Conread position: | 17-767 |
| Cow position: | chr8:48407121-48406371 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 23-716 |
| Cow position: | chr8:45201281-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-767 |
| Cow position: | chr8:46816056-46816800 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 25-767 |
| Cow position: | chr8:46816310-46817052 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 628, 616 |
| Conread position: | 26-767 |
| Cow position: | chr8:46815888-46816632 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 196 |
| Conread position: | 26-767 |
| Cow position: | chr8:55580836-55581577 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 27-362 |
| Cow position: | chr8:55581425-55581759 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 122, 112 |
| Conread position: | 29-464 |
| Cow position: | chr8:6958063-6957630 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 32-764 |
| Cow position: | chr8:55581010-55581742 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 32-766 |
| Cow position: | chr8:45200786-45201520 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 64-766 |
| Cow position: | chr8:48407326-48406624 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 242 |
| Conread position: | 75-766 |
| Cow position: | chr8:45200913-45201604 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 79-766 |
| Cow position: | chr8:55580805-55581492 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 91-766 |
| Cow position: | chr8:48407635-48406960 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 197-632 |
| Cow position: | chr8:6958063-6957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 372, 279 |
| Conread position: | 208-766 |
| Cow position: | chr8:48407685-48407128 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 30 |
| Conread position: | 248-716 |
| Cow position: | chr8:46815534-46815993 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 438, 50 |
| Conread position: | 263-767 |
| Cow position: | chr8:55580736-55581241 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 316 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 411-767 |
| Cow position: | chr8:45200829-45201185 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 499-767 |
| Cow position: | chr8:48407647-48407379 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 157, 145 |
| Conread position: | 537-717 |
| Cow position: | chr8:6958059-6957879 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.