Cow genome map
| Conread name: | Ss1.1-rrec28_p13.5 |
| Conread position: | 1-99 |
| Cow position: | chr6:54043328-54043426 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-322 |
| Cow position: | chr6:54043720-54043946 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 324-723 |
| Cow position: | chr6:66132827-66132429 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 325-505 |
| Cow position: | chr6:54040486-54040666 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 502-676 |
| Cow position: | chr6:54106201-54106375 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-676 |
| Cow position: | chr6:54041466-54041637 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-836 |
| Cow position: | chr6:54041730-54041893 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-836 |
| Cow position: | chr6:54106980-54107143 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 725-927 |
| Cow position: | chr6:66131903-66131698 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 835-968 |
| Cow position: | chr6:54042363-54042496 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 125 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 967-1088 |
| Cow position: | chr6:54042670-54042791 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1082-1255 |
| Cow position: | chr6:54043253-54043426 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1249-1348 |
| Cow position: | chr6:54043720-54043818 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1346-3264 |
| Cow position: | chr6:54044978-54046940 (view UCSC Genome Browser custom track) |
| Alignm length: | 2005 |
| Alignm identity: | 1569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 1501-1608 |
| Cow position: | chr6:66131678-66131571 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.