Cow genome map

Conread name: Ss1.1-rret01_o2.5

Conread position: 1-232
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-309
Cow position:
Alignm length: 313
Alignm identity: 201
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 213, 282

Conread position: 2-200
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 176, 172

Conread position: 2-242
Cow position:
Alignm length: 243
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 219, 0

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-212
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 95

Conread position: 3-242
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 211, 0

Conread position: 3-298
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 210, 15

Conread position: 4-192
Cow position:
Alignm length: 189
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-202
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-212
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-292
Cow position:
Alignm length: 290
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 206, 0

Conread position: 6-212
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 95

Conread position: 7-309
Cow position:
Alignm length: 305
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 207, 0

Conread position: 9-195
Cow position:
Alignm length: 187
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 181, 0

Conread position: 9-212
Cow position:
Alignm length: 204
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-215
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 89

Conread position: 9-238
Cow position:
Alignm length: 231
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 205, 0

Conread position: 9-295
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 205, 0

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 193
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 159, 142

Conread position: 9-305
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 204, 259

Conread position: 9-308
Cow position:
Alignm length: 302
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 205, 0

Conread position: 9-309
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 205, 266

Conread position: 9-309
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 169, 165

Conread position: 10-305
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 204, 265

Conread position: 12-232
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 155

Conread position: 14-212
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 17-192
Cow position:
Alignm length: 176
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-200
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 79

Conread position: 17-209
Cow position:
Alignm length: 194
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 62

Conread position: 17-212
Cow position:
Alignm length: 196
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-212
Cow position:
Alignm length: 196
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-232
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 159, 142

Conread position: 17-242
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 197, 0

Conread position: 17-308
Cow position:
Alignm length: 295
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 19

Conread position: 18-161
Cow position:
Alignm length: 144
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-212
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 154, 135

Conread position: 18-212
Cow position:
Alignm length: 195
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-309
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 80

Conread position: 18-309
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 196, 217

Conread position: 18-309
Cow position:
Alignm length: 295
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 181, 194

Conread position: 23-255
Cow position:
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 74

Conread position: 34-305
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 125

Show alignments to all cow chromosomes.