Cow genome map


           Conread name:
           Ss1.1-rret01_o2.5
        

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-309
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               73, 146
               

               Conread position:
               3-178
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               3-262
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               211, 203
               

               Conread position:
               5-204
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               136, 140
               

               Conread position:
               6-309
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               258, 234
               

               Conread position:
               7-312
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               8-309
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               207, 40
               

               Conread position:
               9-194
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               16-254
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               17-305
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               353-707
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 41
               
Show alignments to all cow chromosomes.