Cow genome map
| Conread name: | Ss1.1-rret01_o2.5 |
| Conread position: | 1-199 |
| Cow position: | chr2:78754559-78754753 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 1-232 |
| Cow position: | chr2:78755299-78755529 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-309 |
| Cow position: | chr2:78755967-78756278 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 146 |
| Conread position: | 3-178 |
| Cow position: | chr2:78754645-78754816 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-237 |
| Cow position: | chr2:78755049-78755284 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 3-238 |
| Cow position: | chr2:78754965-78755201 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 3-262 |
| Cow position: | chr2:78755717-78755978 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 3-309 |
| Cow position: | chr2:78755133-78755440 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 211, 203 |
| Conread position: | 5-204 |
| Cow position: | chr2:78755803-78756002 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 136, 140 |
| Conread position: | 6-309 |
| Cow position: | chr2:78754480-78754781 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 258, 234 |
| Conread position: | 7-312 |
| Cow position: | chr2:78756141-78756445 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 8-309 |
| Cow position: | chr2:78755473-78755773 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 207, 40 |
| Conread position: | 9-194 |
| Cow position: | chr2:82800253-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 9-232 |
| Cow position: | chr2:78754887-78755111 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 16-254 |
| Cow position: | chr2:78754408-78754646 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 17-305 |
| Cow position: | chr2:78754811-78755101 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 353-707 |
| Cow position: | chr2:78756454-78756807 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 41 |
Show alignments to all cow chromosomes.