Cow genome map

Conread name: Ss1.1-rret01_o2.5

Conread position: 3-132
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 79

Conread position: 3-212
Cow position:
Alignm length: 212
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 110

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 175, 166

Conread position: 3-232
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 84

Conread position: 3-232
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 79

Conread position: 3-238
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 211, 0

Conread position: 3-242
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 24

Conread position: 3-305
Cow position:
Alignm length: 306
Alignm identity: 191
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 211, 272

Conread position: 3-308
Cow position:
Alignm length: 308
Alignm identity: 189
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 210, 0

Conread position: 3-308
Cow position:
Alignm length: 308
Alignm identity: 195
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 211, 0

Conread position: 3-309
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 175, 168

Conread position: 3-309
Cow position:
Alignm length: 309
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 211, 0

Conread position: 4-194
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-308
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 72

Conread position: 7-199
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 73

Conread position: 8-238
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 9-195
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 85

Conread position: 9-195
Cow position:
Alignm length: 187
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-199
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 170, 150

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-200
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-208
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 169, 160

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-212
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 9-219
Cow position:
Alignm length: 212
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 78

Conread position: 9-232
Cow position:
Alignm length: 226
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 100

Conread position: 9-232
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 205, 0

Conread position: 9-237
Cow position:
Alignm length: 230
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 205, 0

Conread position: 9-241
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 204, 226

Conread position: 9-242
Cow position:
Alignm length: 235
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 204, 0

Conread position: 9-293
Cow position:
Alignm length: 289
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 204, 0

Conread position: 9-305
Cow position:
Alignm length: 301
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 204, 249

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 204, 266

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 205, 253

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 169, 149

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 169, 165

Conread position: 9-305
Cow position:
Alignm length: 299
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 204, 0

Conread position: 9-308
Cow position:
Alignm length: 302
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 205, 0

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 84

Conread position: 13-160
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-238
Cow position:
Alignm length: 225
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 200, 0

Conread position: 16-254
Cow position:
Alignm length: 242
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 189, 198

Conread position: 17-305
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 197, 250

Conread position: 17-309
Cow position:
Alignm length: 296
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 15

Conread position: 18-305
Cow position:
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 18-305
Cow position:
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 196, 235

Conread position: 18-305
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 196, 257

Conread position: 18-305
Cow position:
Alignm length: 290
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 196, 0

Show alignments to all cow chromosomes.