Cow genome map
| Conread name: | Ss1.1-rret01_o2.5 |
| Conread position: | 2-295 |
| Cow position: | chr24:17035743-17035448 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 2-309 |
| Cow position: | chr24:17070590-17070899 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 214, 273 |
| Conread position: | 3-212 |
| Cow position: | chr24:17036330-17036121 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 152, 140 |
| Conread position: | 7-211 |
| Cow position: | chr24:17077789-17077585 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-212 |
| Cow position: | chr24:17077873-17077668 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-255 |
| Cow position: | chr24:17070679-17070929 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 7-305 |
| Cow position: | chr24:17070511-17070811 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 9-199 |
| Cow position: | chr24:17035988-17035798 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-199 |
| Cow position: | chr24:17070849-17071039 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-204 |
| Cow position: | chr24:17078039-17077844 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-209 |
| Cow position: | chr24:17036408-17036208 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-232 |
| Cow position: | chr24:17077955-17077731 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 9-238 |
| Cow position: | chr24:17013218-17013448 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 88 |
| Conread position: | 9-238 |
| Cow position: | chr24:17036072-17035842 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 9-309 |
| Cow position: | chr24:17036240-17035938 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 9-311 |
| Cow position: | chr24:17035820-17035516 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 13-305 |
| Cow position: | chr24:17036488-17036194 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 17-232 |
| Cow position: | chr24:17070437-17070653 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 17-311 |
| Cow position: | chr24:17036148-17035852 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 18-208 |
| Cow position: | chr24:17035307-17035117 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 18-237 |
| Cow position: | chr24:17070774-17070994 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 64 |
Show alignments to all cow chromosomes.