Cow genome map

Conread name: Ss1.1-rret01_o2.5

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 212, 156

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-212
Cow position:
Alignm length: 210
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-237
Cow position:
Alignm length: 236
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 201, 0

Conread position: 3-238
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 210, 0

Conread position: 3-251
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 210, 37

Conread position: 3-292
Cow position:
Alignm length: 292
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 211, 0

Conread position: 3-293
Cow position:
Alignm length: 293
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 234, 247

Conread position: 4-159
Cow position:
Alignm length: 158
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-237
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 96

Conread position: 5-209
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 5-238
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 5-308
Cow position:
Alignm length: 309
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 272

Conread position: 6-255
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 207, 0

Conread position: 6-292
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 208, 0

Conread position: 6-292
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 207, 0

Conread position: 6-309
Cow position:
Alignm length: 306
Alignm identity: 197
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 208, 0

Conread position: 7-209
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-237
Cow position:
Alignm length: 232
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 90

Conread position: 8-295
Cow position:
Alignm length: 293
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 95

Conread position: 9-190
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-193
Cow position:
Alignm length: 185
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-193
Cow position:
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-195
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 9-204
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-209
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-212
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 88

Conread position: 9-237
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 206, 105

Conread position: 9-237
Cow position:
Alignm length: 230
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 204, 0

Conread position: 9-238
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 205, 0

Conread position: 9-242
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 207, 0

Conread position: 9-255
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 9-294
Cow position:
Alignm length: 289
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 102

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 162, 168

Conread position: 9-305
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 212, 272

Conread position: 9-308
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 202, 0

Conread position: 9-308
Cow position:
Alignm length: 303
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 205, 241

Conread position: 9-309
Cow position:
Alignm length: 303
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 204, 0

Conread position: 9-309
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 196, 0

Conread position: 9-371
Cow position:
Alignm length: 375
Alignm identity: 235
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 345

Conread position: 10-262
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 203, 0

Conread position: 12-242
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 30

Conread position: 12-255
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 12

Conread position: 16-309
Cow position:
Alignm length: 296
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 198, 0

Conread position: 17-209
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-247
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 196, 218

Conread position: 17-255
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 196, 0

Conread position: 17-305
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 194, 258

Conread position: 17-312
Cow position:
Alignm length: 299
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 197, 260

Conread position: 18-199
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 141

Conread position: 30-212
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 52

Conread position: 34-256
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 182, 0

Conread position: 41-253
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 173, 0

Show alignments to all cow chromosomes.