Cow genome map

Conread name: Ss1.1-rret01_o2.5

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 213, 0

Conread position: 1-305
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 280

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-209
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 3-238
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 206, 0

Conread position: 3-255
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 211, 0

Conread position: 3-281
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 138, 142

Conread position: 3-295
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 211, 278

Conread position: 3-309
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 272

Conread position: 5-139
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 9-160
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 9-209
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 76, 70

Conread position: 9-212
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 9-245
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 205, 39

Conread position: 9-254
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 206, 18

Conread position: 9-284
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 9-305
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 205, 0

Conread position: 9-305
Cow position:
Alignm length: 299
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 204, 123

Conread position: 9-305
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 187, 45

Conread position: 9-307
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 204, 280

Conread position: 9-309
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 205, 0

Conread position: 9-311
Cow position:
Alignm length: 306
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 10-212
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-203
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 66

Conread position: 14-212
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 14-305
Cow position:
Alignm length: 295
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 197, 113

Conread position: 15-209
Cow position:
Alignm length: 195
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-199
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 17-212
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 17-302
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 196, 15

Conread position: 17-305
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 142

Conread position: 17-305
Cow position:
Alignm length: 289
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 18-212
Cow position:
Alignm length: 195
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-242
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 197, 0

Conread position: 18-309
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 196, 257

Conread position: 20-309
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 194, 0

Conread position: 41-305
Cow position:
Alignm length: 269
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 64

Show alignments to all cow chromosomes.