Cow genome map


           Conread name:
           Ss1.1-rret01_o2.5
        

               Conread position:
               1-309
               

               Cow position:
               chr3:62722279-62721969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               2-291
               

               Cow position:
               chr3:62721860-62721567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 208
               

               Conread position:
               4-199
               

               Cow position:
               chr3:62722024-62721829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-204
               

               Cow position:
               chr3:68045988-68046186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-238
               

               Cow position:
               chr3:62722190-62721957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               6-309
               

               Cow position:
               chr3:62722106-62721801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               9-212
               

               Cow position:
               chr3:68027146-68027349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               169, 156
               

               Conread position:
               12-238
               

               Cow position:
               chr3:62743070-62743292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               202, 45
               

               Conread position:
               12-295
               

               Cow position:
               chr3:62742750-62743031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 251
               

               Conread position:
               18-182
               

               Cow position:
               chr3:68027575-68027739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               18-195
               

               Cow position:
               chr3:62721926-62721749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-200
               

               Cow position:
               chr3:62743155-62743337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.